CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_METCA (Serine hydroxymethyltransferase OS=Methylococcus capsulatus GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 50/105 (47.62%), Postives = 63/105 (60.00%), Query Frame = -3 Query: 487 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRG 798 I A AVALK+A P F+ Y V NA A+ +GY +V+GGT NHL DL GLTG E++ +ITVNKNAV D S G+R+GTPA+T+RG Sbjct: 269 IAAKAVALKEALQPDFRHYQSAVMENADAMAKTFIERGYRIVSGGTRNHLFLVDLIQKGLTGKLAEEVLGRAHITVNKNAVPNDPQSPFVTSGIRVGTPAVTTRG 373
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_LISW6 (Serine hydroxymethyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA +A P F Y +Q+ N+ L L +++TGG++NHL+ DL+PL LTG VEK+ D ITVNKN + F S G+R+G A+T+RG E E++G Sbjct: 263 IAAKAVAFGEALQPEFTTYCEQIIRNSKKLAETLQAHDVTVLTGGSDNHLLLIDLKPLSLTGKAVEKVLDEVGITVNKNTIPFETESPFVTSGIRVGVAAVTTRGFDEVAIEKVG 377
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_LACS1 (Serine hydroxymethyltransferase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = -3 Query: 337 IGALAVALKQASTPAFKAYAKQVKANAVALGN-YLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKAD 798 I A A +A TP FK Y +Q+ N + + + LV+ G++NHL+ D+R GL G + EKL D NITVNKN++ F S G+RIGTPA+TSRG E+D Q+ + + LT+ K+ ++L D + + D + A+ Sbjct: 263 IAGKAAAFGEALTPEFKEYGEQIIRNTQEMALCFADNEKARLVSNGSDNHLLLLDVRNFGLNGKEAEKLLDQVNITVNKNSIPFETLSPFKTSGIRIGTPAITSRGFNEEDSYQVAK-----LILTVLANKDDEQVLADVKRQVKELTDAHPIYAE 413
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_KOSOT (Serine hydroxymethyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = -3 Query: 355 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV--------TLTLEIQKEYGKLLKDFNKGLVNNKDI 798 I A AVA +A FK Y ++ NA AL L G +V+GGT+ HL DL P +TG EK + +ITVNKN + ++ S G+RIGTPA+T+RG+ E + + I E + + T+ EI++E K + + + KD+ Sbjct: 265 IAAKAVAFGEALKDEFKEYQMRIITNAKALAKELENLGLRIVSGGTDTHLFLVDLNPKNVTGKAAEKALESADITVNKNTIPKETRSPFVTSGIRIGTPAVTTRGMGESEMKVIAELIVKVIDNIQDEKGTIPEEIREEVKKAVHELTEKFPLYKDL 421
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_EHRCR (Serine hydroxymethyltransferase OS=Ehrlichia chaffeensis (strain Arkansas) GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = -3 Query: 370 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV-------TLTLEIQKEYGKLLKDFNKGLV 798 I A AVA +A P FK YAKQ+ N+ ALG +G LVTGGT++H+V DLR +TG + I NKNA+ F G+R G+ A TSRGL E +F +IG + ++ L ++++ K +K+ + Sbjct: 270 IAAKAVAFAEALKPEFKDYAKQIIKNSKALGEVFKERGLDLVTGGTDSHMVVLDLRSKSVTGKDAVLALEKLGIICNKNAIPFDPEKPFVTSGLRFGSAAETSRGLQESEFREIGSMVCDVIDSLKASDSVRLSVERDIIKRVKELTSNFI 420
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_BRUSU (Serine hydroxymethyltransferase OS=Brucella suis GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 51/115 (44.35%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I AVA +A FK YAK V NA AL L G +V+GGT+NHL+ DLRP TG + E NIT NKN + F GVR+GTPA T+RG +F++IG Sbjct: 280 IAGKAVAFAEALKLEFKLYAKNVVDNARALAEELKSHGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFGVAEFKEIG 394
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_BRUC2 (Serine hydroxymethyltransferase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 51/115 (44.35%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I AVA +A FK YAK V NA AL L G +V+GGT+NHL+ DLRP TG + E NIT NKN + F GVR+GTPA T+RG +F++IG Sbjct: 280 IAGKAVAFAEALKLEFKLYAKNVVDNARALAEELKSHGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFGVAEFKEIG 394
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_AZOSB (Serine hydroxymethyltransferase OS=Azoarcus sp. (strain BH72) GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 51/115 (44.35%), Postives = 71/115 (61.74%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYL-TGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I A AVA K+A+TPAF+ Y +QV ANA + L +G +V+G TE+H+ DLR +TG + E + +ITVNKN++ D G+RIG+PAMT+RG E + EQI Sbjct: 266 IAAKAVAFKEAATPAFRDYQEQVIANARVMARVLGEERGLRIVSGRTESHVFLVDLRSKNITGKEAEAVLGSAHITVNKNSIPNDPQKPFVTSGIRIGSPAMTTRGFTEIEAEQI 380
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ANASK (Serine hydroxymethyltransferase OS=Anaeromyxobacter sp. (strain K) GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I A AVA +A P FKAY +++ NA L L G LV+GGT+NHL+ DLRP LTG E+ ITVNKN + D + G+R+GTPA+T+RG+ ++ + R + Sbjct: 266 IAAKAVAFGEALRPEFKAYQRRIVENAQVLAEGLKSAGLRLVSGGTDNHLMLVDLRPKKLTGKIAEEALGRAGITVNKNMIPWDPEKPMTTSGIRVGTPALTTRGMGSREMTLVAALIGRVL 387
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ANAD2 (Serine hydroxymethyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.518e-17 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I A AVA +A P FKAY +++ NA L L G LV+GGT+NHL+ DLRP LTG E+ ITVNKN + D + G+R+GTPA+T+RG+ ++ + R + Sbjct: 266 IAAKAVAFGEALRPEFKAYQRRIVENAQVLAEGLKSAGLRLVSGGTDNHLMLVDLRPKKLTGKIAEEALGKAGITVNKNMIPWDPEKPMTTSGIRVGTPALTTRGMGSREMTLVAALIGRVL 387 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |