CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PELPB (Serine hydroxymethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.674e-22 Identity = 58/123 (47.15%), Postives = 71/123 (57.72%), Query Frame = -3 Query: 433 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT 798 I AVA +A PAF+ YA QV NA A+ T GY +V+GGT+NHL+ DLR +TG E L ITVNKN V F D S G+R+GTPAMT+RG+ E D I E R +T Sbjct: 284 IAGKAVAFGEALQPAFRDYAAQVIKNAAAMAEKFTELGYKIVSGGTKNHLMLLDLRSKNVTGKVAENLLHSAGITVNKNMVPFDDKSPFVTSGIRVGTPAMTTRGMNEADSVLIAELIDRVIT 406
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPD (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glyA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.674e-22 Identity = 57/123 (46.34%), Postives = 73/123 (59.35%), Query Frame = -3 Query: 433 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT 798 I AVA +A P F+ YA QVK NA + + + GY++V+GGT+NHL+ DLR + G E L ITVNKN V F D S G+RIGTPAMT+RG+ E D E+I E R V+ Sbjct: 284 IAGKAVAFAEALRPEFRDYALQVKKNAAVMADKFSSLGYTIVSGGTKNHLMLLDLRNKNVNGKVAENLLHQAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMKESDSERIVELIDRVVS 406
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_RICPU (Serine hydroxymethyltransferase OS=Rickettsia peacockii (strain Rustic) GN=glyA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.492e-22 Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = -3 Query: 334 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADV 798 I A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+V DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G ++ D GL NN+D AL+ V Sbjct: 268 IAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGH------------------MVADILDGLKNNEDNSALEQKV 405
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_RICCN (Serine hydroxymethyltransferase OS=Rickettsia conorii GN=glyA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.492e-22 Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = -3 Query: 334 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADV 798 I A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+V DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G ++ D GL NN+D AL+ V Sbjct: 268 IAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGH------------------MVADILDGLKNNEDNSALEQKV 405
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_RICAE (Serine hydroxymethyltransferase OS=Rickettsia africae (strain ESF-5) GN=glyA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.492e-22 Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = -3 Query: 334 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADV 798 I A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+V DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G ++ D GL NN+D AL+ V Sbjct: 268 IAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGH------------------MVADILDGLKNNEDNSALEQKV 405
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.492e-22 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = -3 Query: 394 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLL 798 I A A+ K+A +FK YA ++ +NA AL N LT +G++LV+GGT+NHL+ DL+ + +TG + E + D NIT NKN V D +S G+R+GTPA+T+RG EKD + E V ++ KE K L Sbjct: 267 IAAKAICFKEALDDSFKDYAGKIISNAGALANELTARGFNLVSGGTDNHLMLIDLQNMNITGKEAEHILDEANITCNKNTVPNDPASPFVTSGIRLGTPAITTRGFNEKDMAVVAEAI-SLVVKDVDKNKEQAKAL 401
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.492e-22 Identity = 57/123 (46.34%), Postives = 73/123 (59.35%), Query Frame = -3 Query: 433 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT 798 I AVA +A P FKAYA+Q+K NA A+ GY +V+GGT+NHL+ DLR + G E L ITVNKN V F D S G+RIGTPAMT+RG+ + E+I EF R ++ Sbjct: 284 IAGKAVAFGEALQPEFKAYAQQIKDNAAAMAAKFLAAGYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMKVAEAEKIVEFIDRVIS 406
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_RICAH (Serine hydroxymethyltransferase OS=Rickettsia akari (strain Hartford) GN=glyA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.561e-22 Identity = 58/148 (39.19%), Postives = 82/148 (55.41%), Query Frame = -3 Query: 358 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD 798 + A AVA ++ P +K+Y KQ+ +NA AL + L +GY ++TGGT+NH+V DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG E+DF +G ++ D GL NNKD Sbjct: 268 VAAKAVAFLESLQPEYKSYIKQIISNAKALASSLQERGYDILTGGTDNHIVLVDLRKNGITGKLAANSLDNAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEQDFVSVGH------------------MVADILDGLKNNKD 397
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_GLOVI (Serine hydroxymethyltransferase OS=Gloeobacter violaceus GN=gylA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.561e-22 Identity = 58/123 (47.15%), Postives = 75/123 (60.98%), Query Frame = -3 Query: 433 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT 798 I A AVA +A P FK YA V ANA AL LT +G +LV+GGT+NHL+ DLR + LTG + + L NIT NKN + F S G+R+G+PAMT+RGL +F +IGE +T Sbjct: 268 IAAKAVAFGEALQPEFKTYAADVVANARALAERLTARGLTLVSGGTDNHLMLVDLRSVDLTGKQADLLMSDVNITTNKNTIPFDPQSPFVTSGLRLGSPAMTTRGLGTTEFGEIGEIIANRLT 390
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.561e-22 Identity = 57/117 (48.72%), Postives = 70/117 (59.83%), Query Frame = -3 Query: 451 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 798 I A AVA K+A TP FK Y +Q+ NA AL LT +G+ L +GGT+NHL+ DL LTG E+ D ITVNKN + F S G+RIGTPA TS GL E + EQ+ F Sbjct: 263 IAAKAVAFKEALTPEFKKYQEQIVKNAKALAEGLTKRGFKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGTPAATSHGLKEAEMEQVAGF 379 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |