CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_DEIRA (Serine hydroxymethyltransferase OS=Deinococcus radiodurans GN=glyA PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.561e-22 Identity = 55/122 (45.08%), Postives = 75/122 (61.48%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I A AVA +A P FK YA+Q+ NA AL KGY +V+GGT+NHL DLRP GL G K +L D +IT++K+ + + L GG+RIGTPA+T+RG+ E Q+ + RA+ Sbjct: 268 IAAKAVAFGEALRPEFKDYARQIIKNAQALAGEFQQKGYRVVSGGTDNHLFLLDLRPQGLNGTKATRLLDANHITISKSTLPYDTEKILHGGGIRIGTPAVTTRGMTEAHMTQVADLIDRAL 389
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP8 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glyA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.561e-22 Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A VA +A P FKAY+ QV AN+ AL L +G+ LV+GGT+NHL+ DLR +G+TG + ++L NIT NKN V F S G+R+G+PA+T+RG+ E +F++IG Sbjct: 269 IAAKGVAFGEALKPQFKAYSGQVIANSRALAAQLMERGFKLVSGGTDNHLMLVDLRSIGMTGKEADRLVSEINITANKNTVPFDPESPFVTSGLRLGSPALTTRGMGESEFKEIG 383
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_THELT (Serine hydroxymethyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glyA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.957e-22 Identity = 54/127 (42.52%), Postives = 76/127 (59.84%), Query Frame = -3 Query: 421 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLE 798 I A AV K+A + F Y KQV ANA L N L+ G +V+GGT+ HL+ DL PL +TG EK + C +TVNKN + ++ S G+RIGTPA+T+RG+ EK+ ++I E + L+ Sbjct: 265 IAAKAVCFKEAMSSGFVEYQKQVIANAKTLANELSSMGLRIVSGGTDTHLMLVDLTPLNVTGKAAEKALEKCGVTVNKNTIPNETRSPFVASGIRIGTPAVTTRGMREKEMKKIAELIFEVLKNVLD 391
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PERMH (Serine hydroxymethyltransferase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=glyA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.957e-22 Identity = 64/165 (38.79%), Postives = 89/165 (53.94%), Query Frame = -3 Query: 307 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 798 I A AVA K+A T F+ YA Q NA L L +G +V+GGT++H+V DLRPL + GN+ E+ NITVNKNA+ F + G+R+GT A+T+RG+ E D +I K K+LK+ L N K I+ +K DV SS+ + Sbjct: 264 IAAKAVAFKEAMTEEFREYAHQTVKNAKVLAEELKAEGLRIVSGGTDSHIVLVDLRPLNVKGNQAEEALGRANITVNKNAIPFDPEKPMVTSGIRLGTAALTTRGMKENDMRRIA--------------KNIVKVLKN----LDNEKIIQEVKDDVLSLCSSYPL 410
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_NITWN (Serine hydroxymethyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=glyA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.957e-22 Identity = 62/134 (46.27%), Postives = 76/134 (56.72%), Query Frame = -3 Query: 400 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGK 798 I A AVAL +A P FK YAK V NA AL L G G+ +V+GGT+NHL+ DLRP GL GN EK +T NKN + F G+R+GTPA T+RG +F+Q+G A LT Q E GK Sbjct: 279 IAAKAVALGEALRPDFKIYAKNVVENARALAESLRGHGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGLTCNKNGIPFDPEKPFVTSGLRLGTPATTTRGFGVSEFKQVGGLI--AEVLTAIAQAEDGK 410
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_MICAN (Serine hydroxymethyltransferase OS=Microcystis aeruginosa (strain NIES-843) GN=glyA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.957e-22 Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 + A AVA +A P FK Y+ QV ANA AL L +G +VT GT+NHL+ DLR +G+TG + ++L NIT NKN V F S G+R+G+PAMT+RGL E +F +IG Sbjct: 269 VAAKAVAFGEALKPEFKIYSGQVIANAQALAGQLKARGIKIVTDGTDNHLMLLDLRSVGMTGKEADRLVSTINITANKNTVPFDPESPFVTSGLRLGSPAMTTRGLGETEFIEIG 383
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_DESVV (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=glyA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.957e-22 Identity = 62/145 (42.76%), Postives = 80/145 (55.17%), Query Frame = -3 Query: 385 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV------TLTLEIQKEYGKLLKDF 798 I A AVA +A PAFK Y KQV NA AL LT G+ LV+GGT+NHL+ DL +TG E D ITVNKN V F S GVR+GTPA+T+RG+ + E++G + A+ T EI +E + + F Sbjct: 263 IAAKAVAFGEALRPAFKEYQKQVVDNAAALAGVLTAAGFDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGTPALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEISREVERFARQF 407
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_DESVH (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=glyA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.957e-22 Identity = 62/145 (42.76%), Postives = 80/145 (55.17%), Query Frame = -3 Query: 385 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV------TLTLEIQKEYGKLLKDF 798 I A AVA +A PAFK Y KQV NA AL LT G+ LV+GGT+NHL+ DL +TG E D ITVNKN V F S GVR+GTPA+T+RG+ + E++G + A+ T EI +E + + F Sbjct: 263 IAAKAVAFGEALRPAFKEYQKQVVDNAAALAGVLTAAGFDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGTPALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEISREVERFARQF 407
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SALRD (Serine hydroxymethyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=glyA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22 Identity = 56/122 (45.90%), Postives = 72/122 (59.02%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I A AV K+A P+F Y +QV NA A+G L +GY LV+ GT+NHLV DLR GLTG + E+ + IT NKN V F D S G+R+GTPAMT+RG +F + E R + Sbjct: 280 IAAKAVGFKEALKPSFAEYTQQVVDNAQAMGAELRERGYDLVSDGTDNHLVLIDLRNKGLTGKEAEQALEAAGITANKNMVPFDDKSPFVTSGLRLGTPAMTTRGFGPDEFAHVAEMIDRVL 401
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_MYXXD (Serine hydroxymethyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=glyA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22 Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I AVA K+A +P FKAY +Q+ ANA AL L G L +GGT+NHL+ DLRP LTG E++ D ITVNKN + F + GVR+GTPA+T+RG+ E + +G A+ Sbjct: 266 IAGKAVAFKEALSPEFKAYQRQIVANAKALAEALQRAGLRLTSGGTDNHLMLVDLRPKKLTGKVAEEVLDKAGITVNKNMIPFDPEKPMTTSGVRVGTPAITTRGMREAEMAVVGRLIGEAL 387 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |