CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_CHLCH (Serine hydroxymethyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=glyA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22 Identity = 56/123 (45.53%), Postives = 73/123 (59.35%), Query Frame = -3 Query: 433 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT 798 I AVA +A PAFK YA QV NA + + GY++V+GGT+NHL+ DLR +TG + E L ITVNKN V F D S G+RIGTPAMT+RG+ E + +I E + +T Sbjct: 284 IAGKAVAFGEALQPAFKEYAAQVMKNASTMASRFMELGYTIVSGGTKNHLMLLDLRNKNVTGKEAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMKEAESRRIAELIDQVIT 406
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_BACHD (Serine hydroxymethyltransferase OS=Bacillus halodurans GN=glyA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22 Identity = 60/127 (47.24%), Postives = 76/127 (59.84%), Query Frame = -3 Query: 421 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLE 798 I A AVA +A P FK+Y + + NA LG LT +G LV+GGT+NHL+ DLR LGLTG EK D IT NKN + F S G+RIGT A+TSRGL E+ ++IG + LTL+ Sbjct: 263 IAAKAVAFGEALQPEFKSYGEAIIRNAKRLGEKLTSEGIDLVSGGTDNHLLLLDLRSLGLTGKVAEKALDDVGITTNKNTIPFDPESPFVTSGIRIGTAAVTSRGLDEEAMDEIG----ATIALTLK 385
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SYNWW (Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=glyA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.016e-21 Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = -3 Query: 391 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTL------EIQKEYGKLLK 798 I A AV K+A TP FKAY + + NA L L +G +V+GGT+NHL+ D+RP GL G E + + NITVNKNA+ F G+R+GTPA+TSR L D ++ RA+TL L E+++E +++K Sbjct: 267 IAAKAVCFKEALTPEFKAYQQDIVNNAAILAKALMEQGLRVVSGGTDNHLMLVDVRPKGLNGRDAEAILESINITVNKNAIPFDPEKPTVTSGIRVGTPAVTSRALKGDDMRELA----RAITLVLDKHDSEEVKEEARRIVK 405
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_LYSSC (Serine hydroxymethyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=glyA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.016e-21 Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA + P FK YAKQ+K NA AL L +G +V+GGT+NHL+ +++ LGLTG E D IT NKN + + S G+RIGTPA+TSRG E+D +++G Sbjct: 265 IAAKAVAFGEVLQPEFKDYAKQIKLNAKALAEVLIAEGVEIVSGGTDNHLLLLNVKSLGLTGKVAEHALDEVGITTNKNTIPYDTESPFVTSGIRIGTPAVTSRGFKEEDMKEVG 379
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_GEOBB (Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.016e-21 Identity = 57/117 (48.72%), Postives = 69/117 (58.97%), Query Frame = -3 Query: 451 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 798 I A AVA K+A TP FK Y Q+ NA AL LT +G+ L +GGT+NHL+ DL LTG E+ D ITVNKN + F S G+RIGTPA TS GL E + EQ+ F Sbjct: 263 IAAKAVAFKEALTPEFKQYQGQIVKNAKALAEGLTKRGFKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGTPAATSHGLKEAEMEQVAGF 379
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_OCEIH (Serine hydroxymethyltransferase OS=Oceanobacillus iheyensis GN=glyA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.327e-21 Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = -3 Query: 397 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKL 798 I A AV+ K+A + FKAY+KQ+ ANA LG L +G +V+GGT+NHL+ D+ PL LTG EK D IT NKN + F S G+RIGT A+T+RG E++ ++I ++LTL+ ++ KL Sbjct: 263 IAAKAVSFKEALSDDFKAYSKQIVANAKLLGEALNKEGIRIVSGGTDNHLLLLDVTPLQLTGKVAEKALDDIGITTNKNTIPFDQESPFVTSGIRIGTAAVTTRGFGEEEMKEIASI----ISLTLKHHEDEAKL 393
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_GLUOX (Serine hydroxymethyltransferase OS=Gluconobacter oxydans GN=glyA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.327e-21 Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = -3 Query: 421 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLE 798 I AVA +A + FKAY K+V ANA AL + L +G+ +VTGGT++HL+ DLRP +TG E + + IT NKNA+ F G+R+G+PA T+RG E +F ++G +T LE Sbjct: 278 IAGKAVAFGEALSDEFKAYQKRVLANARALADELQNRGFDIVTGGTDSHLILVDLRPKKVTGKLAEAILERAGITANKNAIPFDPEKPFVTSGIRLGSPAATARGFGEAEFREVGRMIDEVLTAALE 404
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_FERNB (Serine hydroxymethyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glyA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.327e-21 Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = -3 Query: 343 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALK 798 I A AV K+A + FKAY Q+ NA AL L +G +V+GGT+ HL+ DL PL +TG E C+ITVNKN + ++ S G+R+GTPA+T+RG+ E+ E+I + VT+ ++ E G + ++ K V+++ IE K Sbjct: 265 IAAKAVCFKEALSDEFKAYQNQIVKNAKALAKALENRGLRIVSGGTDTHLMLVDLNPLNVTGKAAETALGYCHITVNKNTIPNETRSPFVASGIRLGTPALTTRGMKEEQMEEIADLI---VTVLKNVKDEEGNVDEEVAK-RVSDRVIELCK 413
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21 Identity = 60/131 (45.80%), Postives = 77/131 (58.78%), Query Frame = -3 Query: 409 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKE 798 I A AVAL +A P FK Y +Q+ NA AL L +G+ LV GGT+ HL+ DLR GLTG E L D ++TVNKN V F G+RIGTPA+T+RG+ E QI E ++LTL+ +E Sbjct: 266 IAAKAVALGEAQRPEFKTYQEQIVKNARALAQALQERGFELVAGGTDTHLILVDLRNKGLTGAVAEDLLDRVDVTVNKNMVPFDPQPPRVTSGIRIGTPAVTTRGMKEDSMVQIAE----VISLTLDHPEE 392
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21 Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AV K+A P+FK YA QV ANA L L +G+ +++GGT+ HL+ D+ G+ G++ EK ITVNKNA+ F + + P GVRIGTPA+T+RG+ E + Q+G Sbjct: 268 IAAKAVCFKEAMEPSFKDYANQVVANAKVLAQSLADQGFRIISGGTDTHLMLIDVFAAGMLGSEAEKALGEAGITVNKNAIPFDTNPPMKPSGVRIGTPALTTRGMKEPEMRQVG 382 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |