CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21 Identity = 50/127 (39.37%), Postives = 78/127 (61.42%), Query Frame = -3 Query: 418 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEI 798 I +A AL A TP F Y ++V N+ L + L G ++TGGT+NH++ DLR G+ G VE +CD I++N+NA+ G+SS L+P G+R+GT A+T+RG ++ ++G+ V L E+ Sbjct: 290 IAGIASALLHAGTPEFAEYTRRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRNAIVGNSSPLSPSGIRVGTYAVTARGFGPEEMREVGDIIGGVVKLCREM 416
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_RHOP5 (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=glyA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21 Identity = 55/115 (47.83%), Postives = 68/115 (59.13%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA K+A P FK YAK V NA AL L G G+ +V+GGT+NHL+ DLRP L GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G Sbjct: 279 IAAKAVAFKEALQPDFKVYAKNVVENAKALAETLRGHGFDIVSGGTDNHLMLVDLRPKALKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGIRLGTPAATTRGFGVAEFQQVG 393
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PETMO (Serine hydroxymethyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glyA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21 Identity = 61/152 (40.13%), Postives = 87/152 (57.24%), Query Frame = -3 Query: 346 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEAL 798 I A AVA K+A + FK Y KQV N+ AL N L K +V+GGT+ HL DL L +TG +EK C+ITVNKN V ++ S G+RIGTPA+T+RG+ E++ ++I + L+ E G + KD + + KD+ +L Sbjct: 265 IAAKAVAFKEAMSGEFKEYQKQVVRNSKALSNELASKNLRIVSGGTDTHLFLVDLSELNITGKALEKALGQCDITVNKNTVPKETLSPFVTSGIRIGTPAVTTRGMKEEEMKEIASMIAKVANNVLD---EEGNIDKDLAQEI--KKDVVSL 411
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_GEOLS (Serine hydroxymethyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=glyA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21 Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = -3 Query: 385 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT------LTLEIQKEYGKLLKDF 798 I A AVA K+A P FK Y +Q+ NA L L KG+ L +GGT+NHL+ + +TG E+ D ITVNKN V F S G+R+GTPA TS GL E + EQ+ F AV IQK +L+K F Sbjct: 263 IAAKAVAFKEALQPEFKTYQQQIVKNAAKLAECLMAKGFKLTSGGTDNHLMLINFTGTEITGKAAEEALDKAGITVNKNTVPFETRSPFVTSGIRVGTPACTSHGLKETEMEQVAGFIADAVANIGNDEALAAIQKRVNELMKKF 407
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_CLOTH (Serine hydroxymethyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=glyA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21 Identity = 55/123 (44.72%), Postives = 74/123 (60.16%), Query Frame = -3 Query: 433 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT 798 I A AV+ + T FK Y +Q+ NA L N L KG LV+GGT+NHL+ DLR GLTG V+ + D ITVNKN + F S G+RIGTPA+T+RG+ E+D +I + + +T Sbjct: 266 IAAKAVSFAEVLTDEFKQYQQQIVKNAKTLANALMEKGIDLVSGGTDNHLMLVDLRNKGLTGKYVQHILDEVCITVNKNGIPFDPESPFVTSGIRIGTPAVTARGMKEEDMVEIADLINLTIT 388
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ALKMQ (Serine hydroxymethyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glyA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21 Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I A AVA K+A P FKAY +QV NA ALG L +G+ LV+ GT+ HL+ DLR +TG E+L D ITVNKN + F S G+RIGTPA+T+RG+ E++ ++I Sbjct: 265 IAAKAVAFKEALEPGFKAYQEQVIKNAKALGEELKKQGFDLVSDGTDTHLLLIDLRNKNITGKDAERLFDEVGITVNKNTIPFDPQSPFVTSGIRIGTPAVTTRGMKEEEMKKI 378
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_THET8 (Serine hydroxymethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glyA PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 55/122 (45.08%), Postives = 71/122 (58.20%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I AVA +A P FK Y++ V NA L L +GY +VTGGT+NHL DLRP GLTG + E+ D ITVNKNA+ F G+RIGTPA+T+RG ++ + E RA+ Sbjct: 264 IAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_THET2 (Serine hydroxymethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glyA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 55/122 (45.08%), Postives = 71/122 (58.20%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I AVA +A P FK Y++ V NA L L +GY +VTGGT+NHL DLRP GLTG + E+ D ITVNKNA+ F G+RIGTPA+T+RG ++ + E RA+ Sbjct: 264 IAGKAVAFFEALQPEFKEYSRLVVENAKRLAEALARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_THEP1 (Serine hydroxymethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glyA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = -3 Query: 388 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV--------TLTLEIQKEYGKLLKD 798 I A AV K+A T FK Y KQV NA + +GY +V+GGT+ HL DL P +TG EK + C ITVNKN + + S G+RIGTPA+T+RG+ E++ E+I E + T+ E+++E K +++ Sbjct: 265 IAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMIDLVLSNVTDENGTVKPEVREEVSKRVRE 410
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_THEMA (Serine hydroxymethyltransferase OS=Thermotoga maritima GN=glyA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = -3 Query: 388 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV--------TLTLEIQKEYGKLLKD 798 I A AV K+A T FK Y KQV NA + +GY +V+GGT+ HL DL P +TG EK + C ITVNKN + + S G+RIGTPA+T+RG+ E++ E+I E + T+ E+++E K +++ Sbjct: 265 IAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMIDLVLSNVIDENGTVKPEVREEVSKKVRE 410 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |