CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PROA2 (Serine hydroxymethyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glyA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 57/122 (46.72%), Postives = 70/122 (57.38%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I A AVA +A P FK YA QV+ANA A+ Y++V+GGT+NHL+ DLR +TG E L ITVNKN V F D S G+RIGTPAMT+RG+ E E I R + Sbjct: 284 IAAKAVAFGEALQPEFKEYAVQVRANAAAMAQKFISLDYNIVSGGTKNHLMLIDLRNKNVTGKVAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMTESHAEAIVSLIDRVI 405
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_RICM5 (Serine hydroxymethyltransferase OS=Rickettsia massiliae (strain Mtu5) GN=glyA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21 Identity = 61/156 (39.10%), Postives = 84/156 (53.85%), Query Frame = -3 Query: 334 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADV 798 I A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+V DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF + G ++ D GL NN+D L+ V Sbjct: 268 IAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKFAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLV------------------GYMVADILDGLKNNEDNSDLEQKV 405
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_RHOP2 (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=glyA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21 Identity = 56/115 (48.70%), Postives = 68/115 (59.13%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA K+A P FK YAK V NA AL L G+ LV+GGT+NHL+ DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G Sbjct: 279 IAAKAVAFKEALQPDFKVYAKNVVENAKALAETLRAAGFDLVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVG 393
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_HYPME (Serine hydroxymethyltransferase OS=Hyphomicrobium methylovorum GN=glyA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21 Identity = 55/115 (47.83%), Postives = 69/115 (60.00%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I AVA +A P FK Y KQV NA ALG L G++LV+GGT+ HLV DLRP LTG K EK NIT NKN + F + G+R+G+PA T+RG +F++IG Sbjct: 280 IAGKAVAFGEALRPDFKVYIKQVMDNARALGEVLVQNGFALVSGGTDTHLVLVDLRPKKLTGTKAEKALGRANITCNKNGIPFDPEKPMVTSGIRLGSPAGTTRGFGVAEFQEIG 394
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21 Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = -3 Query: 433 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT 798 I AVA +A P FKAYA+Q+K NA A+ Y +V+GGT+NHL+ DLR + G E L ITVNKN V F D S G+R+GTPAMT+RG+ + E+I EF R ++ Sbjct: 284 IAGKAVAFGEALQPEFKAYAQQIKDNAAAMAAKFLAADYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHDAGITVNKNMVPFDDKSPFVTSGIRVGTPAMTTRGMKVAEAEKIVEFIDRVIS 406
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_BORRA (Serine hydroxymethyltransferase OS=Borrelia recurrentis (strain A1) GN=glyA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21 Identity = 61/166 (36.75%), Postives = 84/166 (50.60%), Query Frame = -3 Query: 304 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMP 798 I AVA K+A FK Y +V N A+ Y +G +V+GGT+NHL DL LG+TG EK+ + NIT+NKNA+ F + G+RIG PA+TSRGL D ++ F RA+ + ++ +K +V F SSFDMP Sbjct: 271 IAGKAVAFKEALNKEFKDYISRVIENTKAMAEYFISEGLRIVSGGTDNHLFLVDLSGLGITGADAEKILESVNITLNKNAIPFDSKNPSVASGIRIGAPAITSRGLNRDDSIKVAHFIIRALKTK-------------------STDELRKIKQEVIGFISSFDMP 417
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_BORDL (Serine hydroxymethyltransferase OS=Borrelia duttonii (strain Ly) GN=glyA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21 Identity = 61/166 (36.75%), Postives = 84/166 (50.60%), Query Frame = -3 Query: 304 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMP 798 I AVA K+A FK Y +V N A+ Y +G +V+GGT+NHL DL LG+TG EK+ + NIT+NKNA+ F + G+RIG PA+TSRGL D ++ F RA+ + ++ +K +V F SSFDMP Sbjct: 271 IAGKAVAFKEALNKEFKDYISRVIENTKAMAEYFISEGLRIVSGGTDNHLFLVDLSGLGITGADAEKILESVNITLNKNAIPFDSKNPSVASGIRIGAPAITSRGLNRDDSIKVAHFIIRALKTK-------------------STDELRKIKQEVIGFISSFDMP 417
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA2_RALSO (Serine hydroxymethyltransferase 2 OS=Ralstonia solanacearum GN=glyA2 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21 Identity = 56/115 (48.70%), Postives = 67/115 (58.26%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I AVA +A P FK Y V ANA ALG L G LVTGGT+NHL+ DLRP GL G +VE+ + IT NKN + F G+R+GTPA T+RG +FEQIG Sbjct: 272 IAGKAVAFGEALKPEFKTYIDSVLANAKALGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPTITSGIRLGTPAATTRGFGVAEFEQIG 386
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SULSY (Serine hydroxymethyltransferase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=glyA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.043e-21 Identity = 64/165 (38.79%), Postives = 89/165 (53.94%), Query Frame = -3 Query: 307 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 798 I A AVA +A T FK YA+QV NA AL L +G +V+GGT++H++ DLRPL + GN+ E+ NITVNKNA+ F G+R+GT A+T+RG+ E D +I K K+LK+ L N K I+ + DV SS+ + Sbjct: 264 IAAKAVAFGEALTEDFKKYAEQVVKNARALAEELMAEGLRIVSGGTDSHMMLVDLRPLNVKGNQAEEALGKANITVNKNAIPFDPEKPTVTSGIRLGTAALTTRGMKENDMRRIA--------------KNIVKVLKN----LDNEKVIQEARDDVLSLCSSYPL 410
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SILST (Serine hydroxymethyltransferase OS=Silicibacter sp. (strain TM1040) GN=glyA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.043e-21 Identity = 54/122 (44.26%), Postives = 72/122 (59.02%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 I A A +A P FK+Y KQV+ANAVAL + L G +VTGGT+ H++ DLRP G+TGN V+K +IT NKN + F G+R+GTPA T+RG E++F +I V Sbjct: 275 IAGKAAAFGEALKPEFKSYQKQVRANAVALADELIKGGLDIVTGGTDTHVMLVDLRPKGVTGNIVDKALGRAHITTNKNGIPFDPEKPTVTSGIRLGTPAGTTRGFGEEEFREIARLIVEVV 396 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |