CF833118

Overview
NameCF833118
Unique NameCF833118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833118 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = -2
Query:  317 RFLGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 487
            R  G HAVK+IGWG  + G  YWI+AN W+  WG +G+F++ RGSN+CG EE + AG
Sbjct:  283 RKTGLHAVKVIGWG-EEKGTPYWIVANSWHDDWGENGFFRMHRGSNDCGFEERMAAG 338          
BLAST of CF833118 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = -2
Query:  317 LGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 481
            +GGHA+++IGWG  +    YW++AN WN  WG  G F++ RG +EC IE DVVAG
Sbjct:  285 VGGHAIRIIGWGV-EKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSIESDVVAG 338          
BLAST of CF833118 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = -2
Query:  302 LGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGFPSSK 481
            L  HAV L+G+GT S  G DYWI+ N W   WG DGYF+I+RG++EC IE   VA  P  K
Sbjct:  402 LTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGEDGYFRIRRGTDECAIESIAVAATPIPK 462          
BLAST of CF833118 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = -2
Query:  302 LGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGFPSSK 481
            L  HAV L+G+GT S  G DYWI+ N W   WG DGYF+I+RG++EC IE   VA  P  K
Sbjct:  374 LTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYFRIRRGTDECAIESIAVAATPIPK 434          
BLAST of CF833118 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = -2
Query:  317 RFLGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 487
            R  GGHAVK+IGWG  + G  YW++AN W+  WG  G++++ RG N C IEE V AG
Sbjct:  117 RMTGGHAVKIIGWG-KEKGTPYWLIANSWHDDWGEKGFYRMIRGINNCRIEEMVFAG 172          
BLAST of CF833118 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = -2
Query:  302 LGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGFPSSK 481
            L  HAV L+G+GT S  G DYWI+ N W   WG +GYF+I+RG++EC IE   VA  P  K
Sbjct:  402 LTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPK 462          
BLAST of CF833118 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = -2
Query:  311 LGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGFP 481
            LGGH VKL+G+GT + G DY+   NQW  SWG +G F IKRG  +CGI +DVVAG P
Sbjct:  258 LGGHCVKLVGFGTLN-GVDYYAANNQWTTSWGDNGTFLIKRG--DCGISDDVVAGLP 311          
BLAST of CF833118 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = -2
Query:  302 LGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGFPSSK 481
            L  HAV L+G+GT +  G DYWI+ N W  SWG +GYF+I+RG++EC IE   +A  P  K
Sbjct:  402 LTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAIESIALAATPIPK 462          
The following BLAST results are available for this feature:
BLAST of CF833118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
CYSP1_OSTOS1.139e-1254.39Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]
CYSP_SCHJA1.488e-1252.73Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CATC_PONAB1.943e-1254.10Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATC_CANFA2.538e-1254.10Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CYSP3_OSTOS4.329e-1252.63Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
CATC_HUMAN7.385e-1252.46Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CTSB_DICDI1.260e-1159.65Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]
CATC_BOVIN1.645e-1150.82Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03A21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833118 ID=CF833118; Name=CF833118; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTTGGAGCAATGATGTGACATTTTTCATCTAAACGA
ATAATTCGGCGAGGAGAAACGAAGTTATTACAACTGGTTCTATTTTTACA
CACAACATTAAACTCCATTAATACATTCAATTATGCAAGACGGGAGCTTC
CCATTTCATGCCTTGATAGCTTAGGGTCAACGATACACCCCTATAGCTAC
ACATTTGATATATAAATAACAACATGAAGGGATAGCAAAGTCTGCTCTCA
AGCTGAAGCATCCTCAAACATATCTGCACTTGTAATCTCTTTGACAAGAT
TTTTGGATGAAGGGAAACCAGCAACCACATCCTCTTCAATACCACACTCA
TTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATT
CCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCC
AACCAATAAGCTTAACAGCATGACCCCCAAGGAACCGAACGACGCCGTCG
TTTACATCTTCATTTACGTCGTCAACGACAGCAACTCAGCCAAAGCCCGC
CTGGCAACCCAGCAAGCCGTCATGGACTCACCAACCAGCGCAGACCGGGA
TAGAAAGCGCTCCCGTTTCTATGGTGGGTGATATTCATGGCAAGAGTTGG
GCGACTACGGCCCCGTCCAAGTCCAGTTCTGGGATTGGG
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