CF833130

Overview
NameCF833130
Unique NameCF833130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT_YEAST (Probable alanine aminotransferase OS=Saccharomyces cerevisiae GN=ALT2 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 103/234 (44.02%), Postives = 144/234 (61.54%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY---GEKD-ISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E + W   + E++K ++ A  K I    L+VINPGNPTG VL+EE    I     K G+ +++DEVYQEN++  + KFHS KKV R + +   G+ D + L S  S+SKG+  ECG+RGGYME+ GFS E+R+ ++K+ S+++CS ++GQ +  L++ PP+ GDESYE    ER  I   +  RA  L + F  LEGI C K +GAMYLFPR+ LP             PD FY
Sbjct:  220 EESNWSTNSDEIEKVVQDALKKQIRPSVLIVINPGNPTGAVLSEETIARICLIAAKYGITIISDEVYQENIF-NDVKFHSMKKVLRKLQHLYPGKFDNVQLASLHSISKGFMDECGQRGGYMEIIGFSQEIRDALFKLMSISICSVVTGQAVVDLMVKPPQPGDESYEQDHDERLKIFHEMRTRANLLYETFKELEGIECQKPQGAMYLFPRLVLPKKALCESERLGIEPDEFY 452          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT2_XENTR (Alanine aminotransferase 2 OS=Xenopus tropicalis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 102/232 (43.97%), Postives = 139/232 (59.91%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG--YGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W L+ +E+++ L  A+ K    + L +INPGNPTGQV + +    ++ F  +E L L+ADEVYQ+NVY     FHSFKKV   MG  Y E  + L SF S SKGY GECG RGGYMEV    P V++Q+ K+ SV LC  + GQ L  ++++PPK G+ SY+ + AE+  +L +LA +A+  E+  N   GI CN  +GAMY FPRI +P             PD F+
Sbjct:  238 EENCWALDINELRRSLTEAR-KHCDPKVLCIINPGNPTGQVQSRKCIEDVIRFAAEENLFLMADEVYQDNVYAKGCTFHSFKKVLFEMGPKYSET-VELASFHSTSKGYMGECGFRGGYMEVINMDPAVKQQLTKLVSVRLCPPVPGQALLDVIVNPPKPGEPSYKQFMAEKQAVLGNLAEKARLTEEILNQSPGIRCNPVQGAMYSFPRIHIPEKAIKLAQAEGQAPDMFF 467          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT1_HUMAN (Alanine aminotransferase 1 OS=Homo sapiens GN=GPT PE=1 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 1.813e-50
Identity = 108/233 (46.35%), Postives = 138/233 (59.23%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG---YGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W L+ +E+ + L  A+      RAL VINPGNPTGQV   E   A++ F  +E L LLADEVYQ+NVY    +FHSFKKV   MG    G+++  L SF S SKGY GECG RGGY+EV      V++Q+ K+ SV LC  + GQ L  LV+SPP   D S+  + AE+  +L+ LA +AK  E  FN   GI+CN  +GAMY FPR+QLP             PD F+
Sbjct:  210 EERAWALDVAELHRALGQARDH-CRPRALCVINPGNPTGQVQTRECIEAVIRFAFEERLFLLADEVYQDNVYAAGSQFHSFKKVLMEMGPPYAGQQE--LASFHSTSKGYMGECGFRGGYVEVVNMDAAVQQQMLKLMSVRLCPPVPGQALLDLVVSPPAPTDPSFAQFQAEKQAVLAELAAKAKLTEQVFNEAPGISCNPVQGAMYSFPRVQLPPRAVERAQELGLAPDMFF 439          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT1_BOVIN (Alanine aminotransferase 1 OS=Bos taurus GN=GPT PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.368e-50
Identity = 106/232 (45.69%), Postives = 135/232 (58.19%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG--YGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W L+ +E+++ L  A+      RAL VINPGNPTGQV   E    ++ F  +E L LLADEVYQ+NVY    +FHSFKKV   MG  Y  +   L SF S+SKGY GECG RGGY+EV      V++Q+ K+ SV LC    GQ+L  + +SPP   D S+  + AER  +L+ LA +AK  E  FN   GI CN  +GAMY FPR+QLP             PD F+
Sbjct:  210 EERAWALDVAELRRALRQARDH-CRPRALCVINPGNPTGQVQTRECIEDVIRFAYEEKLFLLADEVYQDNVYAESSQFHSFKKVLTEMGPPYAAQQ-ELASFHSISKGYMGECGFRGGYVEVVNMDAAVKQQMQKLRSVRLCPPTPGQVLLDVAVSPPAPSDPSFPRFQAERRAVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPRVQLPPRAVQRAQELGLAPDMFF 439          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: ALAT_SCHPO (Putative alanine aminotransferase OS=Schizosaccharomyces pombe GN=SPBC582.08 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.131e-47
Identity = 92/235 (39.15%), Postives = 139/235 (59.15%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD-----ISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFY 691
            E   W ++  + KK  + A  KGI VR  VVINPGNPTG  ++E +   ++ F K +G+VLLADEVYQ N+Y  + KFHSF++    +   E D     +SL+S  SVSKG  GECG+RGGY++V       ++QI K+A++++C  ++GQ+L  ++++PPK GD SY+ +  E D I  +L  + + L +    ++ ++C +  GAMYL P + LP             PD FY
Sbjct:  219 EENNWDIDFDQFKKSFDEASKKGINVRLCVVINPGNPTGACISENSMEKVLRFAKAKGIVLLADEVYQNNIY--QNKFHSFRRKLGELREKEPDNHWDQVSLISVNSVSKGQFGECGQRGGYLDVVNIPEPAKDQILKLATIDICPPVAGQLLVDMLVNPPKPGDPSYDLFIKEVDEIHEALRLQCRQLYEGTKRMKRVSCLEPHGAMYLHPSVSLPEKLITTAKAQKIQPDEFY 451          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: YFBQ_SHIFL (Uncharacterized aminotransferase yfbQ OS=Shigella flexneri GN=yfbQ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 62/207 (29.95%), Postives = 103/207 (49.76%), Query Frame = 2
Query:   23 ETSEVKKQLEAAKAKGIT--VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVR---EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 628
            E+S+    L+  +AK IT   R +V+INP NPTG V ++E    IV+  ++  L++ ADE+Y + +Y  + + HS   ++        D+  ++F  +SK Y    G R G+M + G     +   E +  +AS+ LC+N+  Q      +     G +S   +     G L     RA  L    N + G++C K  GA+Y+FP+I
Sbjct:  150 ESSDWFPDLDDIRAK-ITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILY-DDAEHHSIAPLA-------PDLLTITFNGLSKTYR-VAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALG----GYQSISEFITP-GGRLYEQRNRAWEL---INDIPGVSCVKPRGALYMFPKI 338          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOLI (Uncharacterized aminotransferase yfbQ OS=Escherichia coli (strain K12) GN=yfbQ PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 62/207 (29.95%), Postives = 103/207 (49.76%), Query Frame = 2
Query:   23 ETSEVKKQLEAAKAKGIT--VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVR---EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 628
            E+S+    L+  +AK IT   R +V+INP NPTG V ++E    IV+  ++  L++ ADE+Y + +Y  + + HS   ++        D+  ++F  +SK Y    G R G+M + G     +   E +  +AS+ LC+N+  Q      +     G +S   +     G L     RA  L    N + G++C K  GA+Y+FP+I
Sbjct:  150 ESSDWFPDLDDIRAK-ITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILY-DDAEHHSIAPLA-------PDLLTITFNGLSKTYR-VAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALG----GYQSISEFITP-GGRLYEQRNRAWEL---INDIPGVSCVKPRGALYMFPKI 338          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOL6 (Uncharacterized aminotransferase yfbQ OS=Escherichia coli O6 GN=yfbQ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 62/207 (29.95%), Postives = 103/207 (49.76%), Query Frame = 2
Query:   23 ETSEVKKQLEAAKAKGIT--VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVR---EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 628
            E+S+    L+  +AK IT   R +V+INP NPTG V ++E    IV+  ++  L++ ADE+Y + +Y  + + HS   ++        D+  ++F  +SK Y    G R G+M + G     +   E +  +AS+ LC+N+  Q      +     G +S   +     G L     RA  L    N + G++C K  GA+Y+FP+I
Sbjct:  150 ESSDWFPDLDDIRAK-ITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILY-DDAEHHSIAPLA-------PDLLTITFNGLSKTYR-VAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALG----GYQSISEFITP-GGRLYEQRNRAWEL---INDIPGVSCVKPRGALYMFPKI 338          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: AAT_MYCTU (Probable aspartate aminotransferase OS=Mycobacterium tuberculosis GN=aspC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 60/212 (28.30%), Postives = 98/212 (46.23%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTG---FSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 628
            E  GW  + ++++ ++          +ALVVINP NPTG V + E    +VD  +K  L+LLADE+Y + +Y   K          S+     D+  ++F  +SK Y    G R G++ +TG    +    E I  +A++ LC N+  Q    + +     G +S E        +L     +        N + G++C K  GA+Y FPR+
Sbjct:  175 ETQGWQPDIADLESKITER------TKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLLADEIYDKILYDDAKHI--------SLASIAPDMLCLTFNGLSKAYR-VAGYRAGWLAITGPKEHASSFIEGIGLLANMRLCPNVPAQHAIQVALG----GHQSIEDLVLPGGRLL----EQRDIAWTKLNEIPGVSCVKPAGALYAFPRL 363          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: AAT_MYCBO (Probable aspartate aminotransferase OS=Mycobacterium bovis GN=aspC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 60/212 (28.30%), Postives = 98/212 (46.23%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTG---FSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 628
            E  GW  + ++++ ++          +ALVVINP NPTG V + E    +VD  +K  L+LLADE+Y + +Y   K          S+     D+  ++F  +SK Y    G R G++ +TG    +    E I  +A++ LC N+  Q    + +     G +S E        +L     +        N + G++C K  GA+Y FPR+
Sbjct:  175 ETQGWQPDIADLESKITER------TKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLLADEIYDKILYDDAKHI--------SLASIAPDMLCLTFNGLSKAYR-VAGYRAGWLAITGPKEHASSFIEGIGLLANMRLCPNVPAQHAIQVALG----GHQSIEDLVLPGGRLL----EQRDIAWTKLNEIPGVSCVKPAGALYAFPRL 363          
The following BLAST results are available for this feature:
BLAST of CF833130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ALAT_YEAST1.389e-5044.02Probable alanine aminotransferase OS=Saccharomyces... [more]
ALAT2_XENTR1.389e-5043.97Alanine aminotransferase 2 OS=Xenopus tropicalis G... [more]
ALAT1_HUMAN1.813e-5046.35Alanine aminotransferase 1 OS=Homo sapiens GN=GPT ... [more]
ALAT1_BOVIN2.368e-5045.69Alanine aminotransferase 1 OS=Bos taurus GN=GPT PE... [more]
ALAT_SCHPO7.131e-4739.15Putative alanine aminotransferase OS=Schizosacchar... [more]
YFBQ_SHIFL9.400e-1529.95Uncharacterized aminotransferase yfbQ OS=Shigella ... [more]
YFBQ_ECOLI9.400e-1529.95Uncharacterized aminotransferase yfbQ OS=Escherich... [more]
YFBQ_ECOL69.400e-1529.95Uncharacterized aminotransferase yfbQ OS=Escherich... [more]
AAT_MYCTU9.400e-1528.30Probable aspartate aminotransferase OS=Mycobacteri... [more]
AAT_MYCBO9.400e-1528.30Probable aspartate aminotransferase OS=Mycobacteri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03B05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833130 ID=CF833130; Name=CF833130; organism=Citrus sinensis; type=EST; length=691bp
TGAAGCAACAGGATGGGGATTGGAAACTTCGGAGGTTAAGAAGCAATTGG
AGGCCGCCAAGGCCAAAGGTATTACCGTTAGGGCCTTGGTTGTAATAAAT
CCAGGCAATCCAACTGGACAGGTTCTTGCTGAAGAAAACCAGCGTGCAAT
TGTGGATTTCTGCAAAAAGGAGGGTCTTGTTCTTCTTGCAGATGAGGTAT
ACCAGGAAAATGTTTATGTGCCAGAGAAAAAATTCCATTCCTTTAAGAAG
GTATCCCGATCCATGGGGTATGGTGAGAAGGATATATCCCTTGTATCATT
TCAGTCAGTTTCTAAAGGTTACCATGGGGAGTGTGGAAAAAGAGGAGGTT
ACATGGAGGTCACTGGGTTCAGTCCTGAAGTAAGGGAGCAAATATACAAA
GTGGCATCTGTGAATCTTTGTTCTAATATCTCCGGCCAAATTCTGGCAAG
CCTCGTCATGAGTCCACCTAAGGTTGGAGATGAATCTTATGAGTCCTATT
GCGCTGAGAGGGATGGAATCCTCTCATCTTTAGCCAGGCGTGCAAAGACA
TTGGAAGATGCATTTAACAGTTTGGAAGGAATAACATGTAACAAGGCTGA
AGGAGCAATGTATCTCTTTCCTCGTATTCAACTGCCTGAAAAGGCAATTA
AAGCTGCTGAAGCTGAAAAAACTGTTCCAGATGCATTTTAT
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