CF833130

Overview
NameCF833130
Unique NameCF833130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: Y286_HAEIN (Uncharacterized aminotransferase HI0286 OS=Haemophilus influenzae GN=HI0286 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 59/214 (27.57%), Postives = 98/214 (45.79%), Query Frame = 2
Query:    2 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVR---EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL 634
            E   W     ++K ++ A        +A+V+INP NPTG V ++E  + IV+  ++  L++ ADE+Y + +Y      H        +     D+  V+   +SK Y    G R G+M + G     +   E +  +AS+ LC+N+  Q      +     G +S   +      +L    +R K   D    + GITC K  GAMY+FP+I +
Sbjct:  150 EDANWFPTIDDIKAKVNAK------TKAIVIINPNNPTGAVYSKELLQEIVEIARQNNLIIFADEIYDKILYDGAVHHH--------IAALAPDLLTVTLNGLSKAYR-VAGFRQGWMILNGPKHNAKGYIEGLDMLASMRLCANVPMQHAIQTALG----GYQSINEFILPGGRLLE---QRNKAY-DLITQIPGITCVKPMGAMYMFPKIDV 340          
BLAST of CF833130 vs. ExPASy Swiss-Prot
Match: Y1479_METJA (Uncharacterized aminotransferase MJ1479 OS=Methanocaldococcus jannaschii GN=MJ1479 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.728e-12
Identity = 57/206 (27.67%), Postives = 93/206 (45.15%), Query Frame = 2
Query:   14 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVR-----EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYL 616
            W  +  +++K+++   A    V  ++VINP NPTG V  ++    IVD   +  L ++ DE+Y   VY   KK H   +V         D+  +S + +SK      G R G++E+     +       E IYK   + +CS    Q+    +M     G  +Y+ Y  ER+       +R+ T       L+G+  NKA GA Y+
Sbjct:  155 WYPDIDDLEKRIKYNPA----VSGILVINPDNPTGAVYPKKILNEIVDLANEYDLFIICDEIYCNLVY-NGKKQHLLCEVI-------DDVCGLSLKGISKELPWP-GARCGWIEIYNADKDEEFKKYVESIYKAKLIEVCSTTLPQMAIPRIM-----GHRNYKKYLEERNRFFE---KRSNTAYKKLKDLDGVIANKANGAFYM 339          
The following BLAST results are available for this feature:
BLAST of CF833130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
Y286_HAEIN1.773e-1327.57Uncharacterized aminotransferase HI0286 OS=Haemoph... [more]
Y1479_METJA9.728e-1227.67Uncharacterized aminotransferase MJ1479 OS=Methano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03B05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833130 ID=CF833130; Name=CF833130; organism=Citrus sinensis; type=EST; length=691bp
TGAAGCAACAGGATGGGGATTGGAAACTTCGGAGGTTAAGAAGCAATTGG
AGGCCGCCAAGGCCAAAGGTATTACCGTTAGGGCCTTGGTTGTAATAAAT
CCAGGCAATCCAACTGGACAGGTTCTTGCTGAAGAAAACCAGCGTGCAAT
TGTGGATTTCTGCAAAAAGGAGGGTCTTGTTCTTCTTGCAGATGAGGTAT
ACCAGGAAAATGTTTATGTGCCAGAGAAAAAATTCCATTCCTTTAAGAAG
GTATCCCGATCCATGGGGTATGGTGAGAAGGATATATCCCTTGTATCATT
TCAGTCAGTTTCTAAAGGTTACCATGGGGAGTGTGGAAAAAGAGGAGGTT
ACATGGAGGTCACTGGGTTCAGTCCTGAAGTAAGGGAGCAAATATACAAA
GTGGCATCTGTGAATCTTTGTTCTAATATCTCCGGCCAAATTCTGGCAAG
CCTCGTCATGAGTCCACCTAAGGTTGGAGATGAATCTTATGAGTCCTATT
GCGCTGAGAGGGATGGAATCCTCTCATCTTTAGCCAGGCGTGCAAAGACA
TTGGAAGATGCATTTAACAGTTTGGAAGGAATAACATGTAACAAGGCTGA
AGGAGCAATGTATCTCTTTCCTCGTATTCAACTGCCTGAAAAGGCAATTA
AAGCTGCTGAAGCTGAAAAAACTGTTCCAGATGCATTTTAT
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