CF833167

Overview
NameCF833167
Unique NameCF833167
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.099e-14
Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = -1
Query:  254 GTVEY-WTRCNKSL--SYTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLV---ESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 625
            G VEY WT C+ ++   +       +  +R+L + G +V VYSGD D VVP  +T   + +L LP++T W PW +   E +V G+  +Y+G     LT+ +  GAGH  P +RP +   +  ++    P+
Sbjct:  368 GIVEYPWTVCSNTIFDQWGQAADDLLPVYRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEG-----LTYVSPSGAGHLVPVHRPAQAFLLFKQFLKGEPM 492          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.552e-13
Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = -1
Query:  254 GTVEY-WTRCNKSLS--YTCDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYR-YKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 625
            G + Y WT C+ +++  +     S +  +R+L   G ++ V+SGD D VVP  AT   I +L L   T W PW  + Q  G W + YKG     LT  +V+GAGH  P +RP++ L +  ++    P+
Sbjct:  344 GAMNYTWTNCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLATTTSWYPWYDDLQEVGGWSQVYKG-----LTLVSVRGAGHEVPLHRPRQALILFQQFLQGKPM 466          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.647e-13
Identity = 44/124 (35.48%), Postives = 62/124 (50.00%), Query Frame = -1
Query:  254 WTRCNKSLSYTCDVS----SGVDYHRKLTKKGY-QVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 610
            W  CN++  +  + +    S +   ++L K    +V VY+GD D V+P   T   +K +NL   T W PW  E QV G+   YKG   Y    ATV GAGH  P Y+PK  L +   +  + PL
Sbjct:  378 WMLCNEATGFNWNQTDYSASMLPILKELMKHDQLRVWVYTGDTDTVIPLTVTMHALKMMNLTAVTDWLPWFSEGQVGGFTEEYKGNFRY----ATVIGAGHEVPLYKPKAALTLFKHFIRNSPL 497          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13
Identity = 49/137 (35.77%), Postives = 71/137 (51.82%), Query Frame = -1
Query:  257 ALRVREGTVEYWTRCN--KSLSYT-CDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVE-----SQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYP 643
            AL + E ++  W  CN   +L Y     S    Y + L+ + YQ+L+Y+GDVDM   +M  E ++ SLN  +E   +PWLV+      QVAG+      K   H+TF T+KGAGH  P  +P+    M  R+    P
Sbjct:  343 ALHIPE-SLPRWDMCNFLVNLQYRRLYQSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQVAGF-----VKECSHITFLTIKGAGHMVPTDKPRAAFTMFSRFLNKEP 473          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13
Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = -1
Query:  254 WTRCNKSLSYTCDVSSGV-DYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVES----QVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 610
            W+ C+  L+   D +  V    ++L K   +V VYSGD D  VP  ++   +  L LP+   W+PW   +    +V GY  +YKG     L+  TV+GAGH  P Y+P+  L ++  + A   L
Sbjct:  388 WSACSDVLTRWVDSAKTVLPIIQELMKNSIRVWVYSGDTDGRVPVTSSRLSVNQLQLPVAAKWRPWFSSTKGAGEVGGYIVQYKGD----LSLVTVRGAGHEVPSYQPRRALVLVQNFLAGKAL 507          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = -1
Query:  254 WTRCNKSLSYT---CDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWL-VESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 610
            W  C++ ++     C+ S    YH +L + G ++ ++SGD D V+P  +T   I +L LP  T W  W   + +V G+   YKG     L F TV+GAGH  P +RPK+ L +I  + A  P+
Sbjct:  310 WETCSEVINTNWKDCERSVLHIYH-ELIQYGLRIWMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVGGWTQGYKG-----LNFVTVRGAGHEVPLHRPKQALTLIKSFLAGRPM 426          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12
Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = -1
Query:  254 RKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 547
            +KL   G ++ +YSGD D  VP  +T   IK + L +E+ W+ W  +SQVAG+   Y G     L F TV+GAGH  P   P + L +   + +S PL
Sbjct:  382 QKLLTGGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKVESPWRSWFHKSQVAGWVETYAG----GLNFVTVRGAGHQVPALAPAQSLTLFSHFISSVPL 475          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 41/121 (33.88%), Postives = 60/121 (49.59%), Query Frame = -1
Query:  254 WTRCNKSLSYTCDVS--SGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYPL 610
            W  C+  +    D S  S +  +++L   G ++ V+SGD D VVP  AT   + +L L   T W PW    +V G+   YKG     LT  TV GAGH  P +RP++   +   +  S P+
Sbjct:  341 WKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVGGWSQVYKG-----LTLVTVAGAGHEVPLHRPRQAFILFRSFLESKPM 456          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 43/126 (34.13%), Postives = 63/126 (50.00%), Query Frame = -1
Query:  257 WTRCN--KSLSYT-CDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVE-----SQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYP 610
            W  CN   +L Y     S    Y + L+ + YQ+L+Y+GDVDM   +M  E ++ SLN  +E   +PWLV+      Q+AG+   +      H+ F T+KGAGH  P  +P     M  R+    P
Sbjct:  359 WDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFS-----HIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQP 479          
BLAST of CF833167 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = -1
Query:  257 YHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLPIETGWQPWLVE-----SQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWFASYP 553
            Y + L+ + Y++L+Y+GDVDM   +M  E ++ SLN  +E   +PWLV+      Q+AG+   +      H+ F T+KGAGH  P  +P+  L M  R+    P
Sbjct:  380 YLKLLSAQKYRILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQIAGFVKEFS-----HIAFLTIKGAGHMVPTDKPQAALTMFSRFLNRQP 478          
The following BLAST results are available for this feature:
BLAST of CF833167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
HNLS_SORBI9.099e-1433.08P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
CBP2_HORVU1.552e-1334.38Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP39_ARATH2.647e-1335.48Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
PPGB_MOUSE3.458e-1335.77Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
CBP23_HORVU7.703e-1333.06Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
CBP22_HORVU7.703e-1334.96Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP35_ARATH1.006e-1238.78Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP27_ARATH2.927e-1233.88Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
PPGB_HUMAN6.521e-1234.13Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
PPGB_BOVIN6.521e-1235.58Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_03C07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833167 ID=CF833167; Name=CF833167; organism=Citrus sinensis; type=EST; length=643bp
TTATTATTTCATAAGACAAATATGATTACCAAGCTTATGATGAAAAAAAA
CCGTACACAAATGAGTTTGGAGCGATGTTTTTAAAAAAGCAAATAGGAGC
ATCAAGGCTCTTGCAATACTAATTTTTCAGATCATAAGTTTGGTAAAGCC
AAACATAAATAATTTTATGGGTGTTTACAACGCCATCAGCCACTTAAGCT
CCACATTTATTTTTCAATCTCCAAAACTTAATAATTATATGAACGTGGCT
CTAAAGAGGATAGGATGCGAACCACCTGTCGATCATTGCAAGACATTCCT
TAGGCCTGTACTCTGGACCATTATGACCTGCTCCCTTTACTGTGGCAAAT
GTCAAATGATAATTGTTCTTTCCCTTGTAACGGTACCAATATCCTGCAAC
TTGACTTTCCACCAACCACGGCTGCCAACCAGTTTCAATCGGCAAATTTA
ATGACTTTATCCATGCTTCAGTAGCCATATATGGAACTACCATGTCGACA
TCTCCGCTGTAAACCAAAACTTGATAGCCTTTCTTGGTGAGCTTTCGGTG
ATAATCAACACCACTTGAGACATCACATGTGTAAGACAAACTTTTATTGC
ATCTCGTCCAATATTCTACTGTCCCCTCCCGAACTCTCAGAGC
back to top