CF833304

Overview
NameCF833304
Unique NameCF833304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16
Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = -1
Query:  459 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSR 791
            E+CK+  YD+ + + ++VN WAI RDP  W+ P+ F PERF  +E        +LL FG GRR C G  L    V   L +L+  FEW+  GNV   ++DM+E  G T  +
Sbjct:  381 EDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERFEKEE-----EAQKLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNV---EVDMKEGVGNTVPK 483          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = -1
Query:  495 VAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFI----GKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDL 779
            + GY +   +  +VN WAI RDP +W+ P EF PERF+      E  ++G +  L PFG+GRR C G  LG  TV   +A+LLH FEW +P + +  DL
Sbjct:  403 IDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEW-VPSDEKGVDL 500          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.067e-15
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = -1
Query:  492 GYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFI----GKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLD 773
            G  +   +  +VN+WAI  D  +W  P+ F PERF+    G ++DV G +  L PFGAGRR+C G  LGL TV   +A L+H F+W LP       LD
Sbjct:  428 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD 525          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.393e-15
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = -1
Query:  474 NCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKE--IDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFG 788
            + K+ G+DI   S+++VN W +  +P LW+KP EF PERF+ +E  ++  G++F  LPFG GRR C G  L L  +  T+  L+  FE   P    K  +D  E+ G
Sbjct:  382 DAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSK--IDTSEKGG 486          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.393e-15
Identity = 43/98 (43.88%), Postives = 55/98 (56.12%), Query Frame = -1
Query:  492 GYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFI----GKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLD 773
            G  +   +  +VN+WAI  D  +W  P  F PERFI    G ++DV G +  L PFGAGRR+C G  LGL TV   +A L+H F+W LP       LD
Sbjct:  433 GMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLD 530          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = -1
Query:  474 NCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKE--IDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFG 788
            + K+ GYDI   S+++VN W +  +P  W+KP EF PERF+ +E  ++  G++F  LPFG GRR C G  L L  +  T+  L+  FE   P    K  +D  E+ G
Sbjct:  382 DAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG--KSKIDTSEKGG 486          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = -1
Query:  459 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSR 791
            + C + GY + +++ V++N WAI RDP LW +   F PERF  K     G   +L+ FG GRR C G  L +  +  TLA L+  F+WKL   +  + +D+ ER G T ++
Sbjct:  377 DECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTFKPERFEKK-----GELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKL---INGDKIDLAERDGFTLTK 479          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = -1
Query:  459 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKP-NEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSR 791
            ++ ++  + I   ++V++N WAIGR+   W     EF PER +   +D  G  FEL+PFG+GRR+C   +  ++  +  LANL+H F+W+L     ++  ++ E  G+   R
Sbjct:  366 QDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTEDQTEVAESTGIAIHR 477          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = -1
Query:  492 NCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKE--IDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLD 788
            + K+ G+DI   S+++VN W +  +P  W+KP EF PERF+ +E  ++  G++F  LPFG GRR C G  L L  +  T+  L+  FE   P    K D D
Sbjct:  382 DAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTD 482          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = -1
Query:  474 NCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKE--IDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFG 788
            + K+ GYDI   S+++VN W +  +P  W++P EF PERF+ +E  ++  G++F  LPFG GRR C G  L L  +  TL  L+  FE   P    K  LD  E+ G
Sbjct:  382 DAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSK--LDTAEKGG 486          
The following BLAST results are available for this feature:
BLAST of CF833304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
C81D1_ARATH8.166e-1640.54Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C78A3_SOYBN8.166e-1643.43Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C78A1_MAIZE1.067e-1542.86Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
TCMO_PEA1.393e-1539.25Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
C78AB_ORYSJ1.393e-1543.88Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
TCMO_CATRO1.819e-1539.25Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C81E1_GLYEC2.376e-1537.84Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71AQ_ARATH2.376e-1533.04Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
TCMO_HELTU3.103e-1539.60Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_GLYEC3.103e-1540.19Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03G08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833304 ID=CF833304; Name=CF833304; organism=Citrus sinensis; type=EST; length=791bp
TTTTTTTTTTTTAAGAAATCAATGTTTCATCTATTTTATTAATAACCTTT
TTATTCATTACTCCGCACTTCGTTCGAGGCGTACACGTCTACAAAGAGCA
AAATTGTGCCACTCAATACATTAAGAAATTAATGTTTCATCTATTTTATT
AATAAGAAAATTTATTTATTACAAAATAATGAAATGCGCTTTATTTTAAA
GAGCATGCACATACTCTCAACATAATTTATTAACCTGATCAACTTCCACT
ATAGAGATCAATTGCCTTGACTATTGCCTTAGATATTTAATAAATACCGA
AAACTTTAACCAGCTAGATGTGGTTAACTTTATTTGATAATAAATCAATA
ACTACGCAAAAGATTAGCCAGACAATATCTAAGTGAAAAGAAGTCCGATC
ACGATGAGTATAGATCAAGAGGAAGTCGAGGCTTAGGAACAACAAGAAGT
GGATTTTTTCTGGACGTTGTGACCCCAAATCTTTCCTCCATATCTAAATC
TTCTTTCCTCACATTACCAGGCAATTTCCATTCAAAACCATGCAAAAGAT
TTGCCAAAGTTGACTGGACCGTTATTAGCCCTAGAGCATAACCAACACAC
ATCCTCCTCCCAGCTCCAAATGGCAGTAGCTCAAAATTATGGCCTACAAC
ATCAATCTCTTTTCCGATGAATCTCTCTGGACAAAACTCATTAGGTTTCT
CCCATAGGGTTGGATCTCTCCCTATTGCCCATACATTTACAATCACACGA
GAGTTTTTAATAATGTCATAGCCAGCTACTTTGCAATTTTC
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