CF833304

Overview
NameCF833304
Unique NameCF833304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = -1
Query:  495 VAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGK--EIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDL 779
            VAGY I K S+V+++ + +GR+P +W  P  F PER + +  E+ +  ++   + F  G+R C   ALG       LA LL GF WKLP N  + +L
Sbjct:  415 VAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENETRVEL 511          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 38/102 (37.25%), Postives = 59/102 (57.84%), Query Frame = -1
Query:  483 VAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKE--IDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEW-KLPGNVRKEDLDMEE 779
            V GY I K S V+++   IGR+P++W+KP++F PER +     +D+   +  ++ F AGRR C+G  +G       LA L+ GF W  +PG   K  +D+ E
Sbjct:  405 VDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPG---KNKIDISE 503          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = -1
Query:  471 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFI--GKEIDVVG-HNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGV 791
            E   + GYDI  ++ V V   AI  DP  W  P +F PERFI  G+E D+ G    +++PFG GRR+C G A+  + +   +A ++  FEW      +K D   +  F V
Sbjct:  384 EPTTLGGYDIPIDANVEVYTPAIAEDPKNWLNPEKFDPERFISGGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEWGAYPPEKKMDFTGKWEFTV 493          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: CP2U1_BOVIN (Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 30/91 (32.97%), Postives = 54/91 (59.34%), Query Frame = -1
Query:  519 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLP 791
            E   + G+ I K + ++ N+W++ RDP +WEKPN+F P+RF+  +  ++      +PFG G+R+C+G  L  + +     +L+  F + LP
Sbjct:  427 EKTVLQGFTIPKGTIILPNLWSVHRDPAIWEKPNDFYPDRFLDDQGQLIKKE-TFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFVLP 516          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11
Identity = 33/97 (34.02%), Postives = 58/97 (59.79%), Query Frame = -1
Query:  498 NCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKED 788
            +C++ G+ I + + ++VN +A+ RDPT WE P+EF PERF+ +E +      + + FG+GRR C G  L  I + + +  ++  F+  + G+  K D
Sbjct:  383 SCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQEEE--RRALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSIKGDKVKMD 477          
The following BLAST results are available for this feature:
BLAST of CF833304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
C79B2_ARATH2.459e-1238.14Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C79A2_ARATH7.154e-1237.25Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C77A3_SOYBN1.594e-1136.36Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
CP2U1_BOVIN2.081e-1132.97Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 S... [more]
C75AK_ARATH4.637e-1134.02Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03G08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833304 ID=CF833304; Name=CF833304; organism=Citrus sinensis; type=EST; length=791bp
TTTTTTTTTTTTAAGAAATCAATGTTTCATCTATTTTATTAATAACCTTT
TTATTCATTACTCCGCACTTCGTTCGAGGCGTACACGTCTACAAAGAGCA
AAATTGTGCCACTCAATACATTAAGAAATTAATGTTTCATCTATTTTATT
AATAAGAAAATTTATTTATTACAAAATAATGAAATGCGCTTTATTTTAAA
GAGCATGCACATACTCTCAACATAATTTATTAACCTGATCAACTTCCACT
ATAGAGATCAATTGCCTTGACTATTGCCTTAGATATTTAATAAATACCGA
AAACTTTAACCAGCTAGATGTGGTTAACTTTATTTGATAATAAATCAATA
ACTACGCAAAAGATTAGCCAGACAATATCTAAGTGAAAAGAAGTCCGATC
ACGATGAGTATAGATCAAGAGGAAGTCGAGGCTTAGGAACAACAAGAAGT
GGATTTTTTCTGGACGTTGTGACCCCAAATCTTTCCTCCATATCTAAATC
TTCTTTCCTCACATTACCAGGCAATTTCCATTCAAAACCATGCAAAAGAT
TTGCCAAAGTTGACTGGACCGTTATTAGCCCTAGAGCATAACCAACACAC
ATCCTCCTCCCAGCTCCAAATGGCAGTAGCTCAAAATTATGGCCTACAAC
ATCAATCTCTTTTCCGATGAATCTCTCTGGACAAAACTCATTAGGTTTCT
CCCATAGGGTTGGATCTCTCCCTATTGCCCATACATTTACAATCACACGA
GAGTTTTTAATAATGTCATAGCCAGCTACTTTGCAATTTTC
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