CF833304

Overview
NameCF833304
Unique NameCF833304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = -1
Query:  492 KVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLD 782
            K+ GYDI   +++++NV+AI RDP LW  P+EF P+RF+   ID  G NFELLPFG+GRR+C G  +G+  V+  L NLL+ F+W LP    KE+ D
Sbjct:  379 KIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLP---EKEEAD 472          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.536e-22
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = -1
Query:  456 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSRK 791
            E C++ G+ I   +R+++N W+IGRDP  WE P+ F PERF     D +G++FE +PFGAG+R+C G   GL  V+  LA LL+ F+WKLP  +   DL +    G++  RK
Sbjct:  370 EECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLYVAGTPGLSGPRK 481          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.007e-22
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = -1
Query:  453 KVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSRKN 782
            ++ GY I   ++V+VNVWA+GRDP  W+    F PERF    ID +G+NFE LPFG GRR+C G + GL      LA LL  F+WKLP  +  +DLD+ E  G++ + K+
Sbjct:  381 EINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMSAASKD 490          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.423e-22
Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = -1
Query:  477 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERF 791
            E C+V GY I K   V VN  AIGRDP  W+ P +F PERF+  +I+  G  F+ +PFG+GRR+C G  L +  +   LA+L+H F W+LP  V  E LDMEE F
Sbjct:  365 ETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELF 469          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.625e-22
Identity = 48/113 (42.48%), Postives = 74/113 (65.49%), Query Frame = -1
Query:  456 KVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGK----EIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSRK 782
            ++ GY +   +RV+V+ WA+GRD T WEKP EF PERF+ +    ++ + G +   +PFG+GRR+C G   G  T++  LANL++ F+W++PG+     + MEE FG+T  RK
Sbjct:  415 EIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGS--GAGVSMEESFGLTLRRK 525          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.625e-22
Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = -1
Query:  477 KVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVR-KEDLDMEERF 782
            K+ GYD+   ++++VNV+A+GRDP LWE  +EF P+RF+   +D  G N+E +PFG+GRR+C G  +G I V+  L NLL+ F+W L      KE ++ EE F
Sbjct:  379 KIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGLAKQEEAKEIINGEENF 481          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.959e-22
Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = -1
Query:  459 VAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFI--GK-EIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSR 779
            V GYDI   +R+ VNVWAIGRDP  WE P EF PERF+  GK ++DV G ++ LLPFG+GRR C G +L L  V   LA L+  F+WK+  +  K  ++MEE+ G+T  R
Sbjct:  385 VCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKVDCDNGK--VNMEEKAGITLPR 492          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.699e-21
Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = -1
Query:  519 KVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLP 782
            K+ GYDI   +++++N +AI RDP LW  P+EF P+RF+   ID  G NFELLPFG+GRR+C G  +G+  V+  L NLL+ F+W LP
Sbjct:  379 KIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLP 466          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.898e-21
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = -1
Query:  471 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLW-EKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGV 791
            ++ K+AGYDI   + V VN WA+ RD   W   P+EF PERF+ KE+D  G ++E +PFG+GRRMC G  LG   ++   ANLL  F +KLP  ++ +D++M+   G+
Sbjct:  377 QDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGL 484          
BLAST of CF833304 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.431e-21
Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -1
Query:  456 ENCKVAGYDIIKNSRVIVNVWAIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSRK 791
            E C +  Y I K+ +++VN W IGRDP  W  P  F PERF+   +D  G++F L+PFGAGRR+C G  +    +   +A  +   +W LP  +  + L +EE+FG+T  ++
Sbjct:  365 ETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKE 476          
The following BLAST results are available for this feature:
BLAST of CF833304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
C71BT_ARATH1.176e-2250.52Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C7D94_MENGR1.536e-2243.75Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71D6_SOLCH2.007e-2246.36Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C80A1_BERST3.423e-2248.57Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71C2_MAIZE7.625e-2242.48Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71BF_ARATH7.625e-2245.63Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN9.959e-2250.91Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71BS_ARATH1.699e-2151.14Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C83A1_ARATH2.898e-2144.44Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C80B1_ESCCA8.431e-2138.39(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03G08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833304 ID=CF833304; Name=CF833304; organism=Citrus sinensis; type=EST; length=791bp
TTTTTTTTTTTTAAGAAATCAATGTTTCATCTATTTTATTAATAACCTTT
TTATTCATTACTCCGCACTTCGTTCGAGGCGTACACGTCTACAAAGAGCA
AAATTGTGCCACTCAATACATTAAGAAATTAATGTTTCATCTATTTTATT
AATAAGAAAATTTATTTATTACAAAATAATGAAATGCGCTTTATTTTAAA
GAGCATGCACATACTCTCAACATAATTTATTAACCTGATCAACTTCCACT
ATAGAGATCAATTGCCTTGACTATTGCCTTAGATATTTAATAAATACCGA
AAACTTTAACCAGCTAGATGTGGTTAACTTTATTTGATAATAAATCAATA
ACTACGCAAAAGATTAGCCAGACAATATCTAAGTGAAAAGAAGTCCGATC
ACGATGAGTATAGATCAAGAGGAAGTCGAGGCTTAGGAACAACAAGAAGT
GGATTTTTTCTGGACGTTGTGACCCCAAATCTTTCCTCCATATCTAAATC
TTCTTTCCTCACATTACCAGGCAATTTCCATTCAAAACCATGCAAAAGAT
TTGCCAAAGTTGACTGGACCGTTATTAGCCCTAGAGCATAACCAACACAC
ATCCTCCTCCCAGCTCCAAATGGCAGTAGCTCAAAATTATGGCCTACAAC
ATCAATCTCTTTTCCGATGAATCTCTCTGGACAAAACTCATTAGGTTTCT
CCCATAGGGTTGGATCTCTCCCTATTGCCCATACATTTACAATCACACGA
GAGTTTTTAATAATGTCATAGCCAGCTACTTTGCAATTTTC
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