CF833592

Overview
NameCF833592
Unique NameCF833592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.350e-25
Identity = 63/162 (38.89%), Postives = 91/162 (56.17%), Query Frame = 3
Query:  123 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 599
            +ISG H+NPAVT    VG ++S+LR   Y  AQLLG+     LL  +T        A   LS+   A  AV  E+ +T  LV  ++A+  D ++G       ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  L  ++Y +
Sbjct:   61 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFAST-DERRGENPGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNY 221          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.350e-25
Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = 3
Query:  123 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 599
            ++SG H+NPAVT    VG ++S LR + Y  AQLLG+     LL  +T        A   L++   A  AV  E+ +T  LV  ++A+  + +  ++GT A ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +A ++Y +
Sbjct:   61 HVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVGTPA-LSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHWVFWIGPLVGAIVASLLYNY 221          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.763e-25
Identity = 68/171 (39.77%), Postives = 99/171 (57.89%), Query Frame = 3
Query:  126 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 599
            +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS+G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+HW++WVGP IG  +A   +++
Sbjct:  101 VSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYG--GGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQY 268          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.303e-25
Identity = 67/169 (39.64%), Postives = 96/169 (56.80%), Query Frame = 3
Query:  126 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 599
            ISGGH+NPAVT G F+   +SL+R +LY +AQ LG+   C  +K   +   T     A  L+ G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++     +WD+ W++WVGP+IG   A   ++F
Sbjct:  101 ISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQF 268          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25
Identity = 65/168 (38.69%), Postives = 98/168 (58.33%), Query Frame = 3
Query:  126 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT--NGQTTSAF-ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDN-HWVYWVGPLIGGGLAGIVYEFFFINQS 617
            +SGGH+NPA+T    VG  ISLLR + Y +AQL+G+     +L  +   N ++  A  AL++   A  AVV E+++TF L   V+++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA++   + + HWV+WVGP++G   A I+Y +     S
Sbjct:   63 VSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSSAHWVFWVGPIVGAATAAIIYFYLLFPHS 229          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25
Identity = 65/168 (38.69%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  126 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ---TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 617
            +SGGH+NPA+T    +G  ISLLR I Y  AQL+G+     +L ++  G      +  ALS+      AVV E+++TF L   ++++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA+V   +  +HWV+WVGP++G  LA I+Y +     S
Sbjct:   63 VSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAVLAAILYFYLLFPSS 229          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.928e-25
Identity = 70/171 (40.94%), Postives = 98/171 (57.31%), Query Frame = 3
Query:  126 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 599
            ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:  105 ISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 272          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.928e-25
Identity = 70/171 (40.94%), Postives = 98/171 (57.31%), Query Frame = 3
Query:  126 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 599
            ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:  106 ISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 273          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.928e-25
Identity = 68/169 (40.24%), Postives = 96/169 (56.80%), Query Frame = 3
Query:  126 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 599
            ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K   +         A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:  105 ISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 272          
BLAST of CF833592 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 5.130e-25
Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 3
Query:  123 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 599
            ++SG H+NPAVT    VG ++S LR   Y  AQLLG+     +L  +T  +     A   L +   A  AV  E+ +T  LV  ++A+  + +  +LG+ A ++IGF V    L G  F G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +  ++Y +
Sbjct:   61 HVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGSPA-LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAVIGSLLYNY 221          
The following BLAST results are available for this feature:
BLAST of CF833592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
AQP2_HUMAN1.350e-2538.89Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP2_BOVIN1.350e-2538.27Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
PIP25_MAIZE1.763e-2539.77Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP24_ARATH2.303e-2539.64Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
AQP5_SHEEP3.007e-2538.69Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_MOUSE3.007e-2538.69Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
PIP24_MAIZE3.928e-2540.94Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE3.928e-2540.94Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ORYSJ3.928e-2540.24Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
AQP2_MOUSE5.130e-2537.65Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_03O07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833592 ID=CF833592; Name=CF833592; organism=Citrus sinensis; type=EST; length=747bp
GTGAAGGCTCGGCCTTAAAAGTTAACAAGCTCACTCACAACGGCGCCAAT
ACCCCCTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTT
CGTTGCTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTG
CTGTCACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGTGGC
ATCCTCTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCT
TCTTAAGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCAT
CTGGAGTTGGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGACATTC
GGACTAGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAG
CTTGGGGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCCAACA
TCTTGGCGGGCGGGGCGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCA
TTCGGGCCAGCTTTGGTGAGCTGGAGCTGGGACAACCACTGGGTCTACTG
GGTCGGGCCACTCATCGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCT
TCTTCATTAACCAGTCGCATGAGCAGCTCCCAACAACCGAGTACTAAGCT
AAAAGCTTGCCATCTATGTGAGTTTGCACGGATGTTGTATTTAATTTGCT
TTTACCGAGGTTCTTTCTTTTTATTTTTAATTTGTGTTTAATTTATG
back to top