CF833769

Overview
NameCF833769
Unique NameCF833769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = -3
Query:  345 SCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 686
            +C+   SK+A  +S+ +     DE ++   L K+GP+AV I+ V +  Y  G++   +C    L+H VL+VGYG          + PYWI KNSWG NWGENGY++     N CG+
Sbjct:  220 ACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIIDYRSGIAT--VCNDNGLNHAVLLVGYGIEN-------DTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 47/129 (36.43%), Postives = 67/129 (51.94%), Query Frame = -3
Query:  345 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYL-DHGVLIVGYGS-------------SGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 683
            C   K +  A + +F ++ ++E ++A  L  +GP+ V IN   +Q Y  GV  + P  C   L DH VL+VG+GS             S   P      PYWI+KNSWG  WGE GY+++  G N CG+
Sbjct:  226 CHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGI 354          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = -3
Query:  345 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYL-DHGVLIVGYGSS-----------GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 683
            C   K    A + +F ++  +E ++A  L   GP+ V IN   ++ Y  GV  + P  C  +L DH VL+VG+G S           G  P   +  P+WI+KNSWG  WG  GY+++  G N CG+
Sbjct:  226 CLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILKNSWGTKWGXGGYFRLYRGNNTCGI 352          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 686
            SC+FD + +AA  S  + I+S  +      V+  GP++V I+A     Q Y  GV     C   YLDH VL VGYGS G        + +W++KNSW  +WG+ GY K+   R N CG+ ++ S
Sbjct:  203 SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEG-------GQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVAS 319          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = -3
Query:  312 CKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 683
            C+ D +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL+VGYG            PYWI+KNSWG +WGE G++KI    N CG+ + ++S A I+
Sbjct:  207 CRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGI-IKYCANNGLNHAVLLVGYGVEN-------NVPYWILKNSWGTDWGEQGFFKIQQNVNACGIKNELASTAEIN 323          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = -3
Query:  339 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM--QTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDS 686
            SC+FD + I A  +    +   E+ +   +   GP++V I+A     Q Y  GV     C   +LDHGVL VGYG+          K YW++KNSWG +WG+ GY K+   R N CG+ S
Sbjct:  202 SCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTES-------TKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIAS 314          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = -3
Query:  315 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 683
            C     K A  V N        ++   +L++H GP+A+ ++AV +  Y GGV   +     L+H VL+VGYG            PYW IKNSWG ++GENGY +I  G N CG+ + ++S A I
Sbjct:  221 CAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGV-ISFCENNGLNHAVLLVGYGIEN-------NVPYWTIKNSWGSDYGENGYVRIRRGVNSCGMINELASSAQI 336          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = -3
Query:  336 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSM 683
            C+++    +A ++ F V+   ED +   +   GP+A G++ +    + Y  GV     C  Y++H VL+VGYG  G          YW+IKNSWG+ WG  GY KI   R N C + S+
Sbjct:  222 CRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNET---DGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASL 337          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = -3
Query:  345 CKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 683
            CKF    I   V    N ++ + DE + A  LV+  P++V    V   + Y  GV     CG     ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+ MG+N+CGV
Sbjct:  238 CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVED-------DVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGV 348          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = -3
Query:  315 CKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 683
            C     K A  V N +  +  +E+++   L   GP+A+ ++AV +  Y GG+   +     L+H VL+VGYG            PYWIIKNSWG ++GE+GY ++  G N CG+ + ++S A +
Sbjct:  221 CALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTDYYGGI-VSFCENNGLNHAVLLVGYGVEN-------NVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 336          
The following BLAST results are available for this feature:
BLAST of CF833769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CATV_NPVST1.091e-1538.79Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATW_HUMAN1.862e-1536.43Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATW_FELCA3.176e-1534.65Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CYSP2_HOMAM2.688e-1437.90Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATV_NPVEP2.688e-1435.20Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CYSP3_HOMAM3.511e-1437.50Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATV_NPVMC3.511e-1437.10Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATQ_RAT4.586e-1434.45Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
ALEUL_ARATH4.586e-1439.17Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATV_NPVSE5.989e-1434.68Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833769 ID=CF833769; Name=CF833769; organism=Citrus sinensis; type=EST; length=688bp
TTTTTTTTTTTTTCTAAAAAGAAAATATAACATTATAATATTTCTACAAG
CCTCCTTAATAAAAAAAGAAAATATTAATACCATCTTCAATAACCCTTCT
GTAGCATGGTTAACTATAAAATAGATAAATATTACATTCTGACATGACAT
ATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCCCAGGCAT
GTAGGCATCGTTATAATTGCAGACGGATATTTAAAAGGATATCCTATAAT
ATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAATGTCTAG
CTTGAGGTTGTATGGATAGCAGCTACAGATGAGACCATGGAGTCGACCCC
ACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTCCCCAGT
TCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTTGAATCTG
ATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCACTCCATGATC
CAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATATGTTT
GCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTTCACCAAA
TTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAATTAGATAC
AGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAAC
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