CF833769

Overview
NameCF833769
Unique NameCF833769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = -3
Query:  315 DEDQMAANLVKHGPLAVG--INAVWMQTYIG-----GVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 623
            +E  M   LVKHGP+AV   ++  ++  + G     G+S P+   +  +H VL+VGYG      I      YWIIKNSWG NWGE+GY++I  G + C ++S+  +VAAI
Sbjct:  355 NEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVTGIE-----YWIIKNSWGSNWGESGYFRIRRGTDECAIESI--AVAAI 457          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = -3
Query:  345 SCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 686
            SC F+K+ I A  + F  +   DE++M   +   GP++V I+A     Q Y  GV     C +  LDHGVL+VGYG+            YW++KNSWG  WGE GY K+   + N CG+
Sbjct:  218 SCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESG------MDYWLVKNSWGTTWGEQGYIKMARNQNNQCGI 330          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 48/124 (38.71%), Postives = 65/124 (52.42%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPL--AVGINAVWMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 683
            CK+  SK  A V + + I+ +DE+ M   +  H P+  A  + A +M  Y  G+     C K  D   H VL VGYG         K  PYWI+KNSWG NWG  GY+ I  G+N+CG+ +  S
Sbjct:  214 CKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------KGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACAS 329          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 47/125 (37.60%), Postives = 67/125 (53.60%), Query Frame = -3
Query:  330 CKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 683
            CKF ++ I   V    N ++ +  E + A  LV+  P++V    V   + Y  GV     CG     ++H VL VGYG     P       YW+IKNSWG +WGE+GY+K+ MG+N+CGV +  S
Sbjct:  236 CKFSQANIGVKVISSVNITLGAEYELKYAVALVR--PVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTP-------YWLIKNSWGADWGEDGYFKMEMGKNMCGVATCAS 351          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 686
            SC F+K  + A    F+ I   DE +MA  +   GP++V I+A     Q Y  GV + P    + LDHGVL+VG+G+          + YW++KNSWG  WG+ G+ K+   + N CG+ S  S
Sbjct:  250 SCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESG------EDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASS 367          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 686
            SCK+      A  + F  I   E  +   +   GP++V ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG+ WG +GY KI   R N CG+ +  S
Sbjct:  210 SCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDK---YWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAAS 329          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = -3
Query:  360 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 686
            SCK+      A V+++  I S E+++   L   GP++  I+A     + Y  G+     C    +DHGVL+VGYG+ G      + K YWIIKNSWG +WG +GY K+   R
Sbjct:   31 SCKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADG---TETENKKYWIIKNSWGTDWGMDGYIKMAKDR 139          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSN---FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 686
            +CKF    +   V N    ++ + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL VGYG     P       YW+IKNSWG +WG+ GY+K+ MG+N+CG+ +  S
Sbjct:  237 TCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVP-------YWLIKNSWGADWGDKGYFKMEMGKNMCGIATCAS 353          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = -3
Query:  345 CKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 683
            C  D  KIA  +++ F     DE+++   +   GP+A+ ++A+ +  Y  G+     C  Y L+H VL++G+G            PYWIIKNSWGE+WGENG+ ++    N CG+
Sbjct:  251 CTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ--CHIYDLNHAVLLIGWGIEN-------NVPYWIIKNSWGEDWGENGFLRVRRNVNACGL 356          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 45/125 (36.00%), Postives = 65/125 (52.00%), Query Frame = -3
Query:  330 CKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 683
            CKF    +   V    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG     ++H VL VGYG     P       YW+IKNSWG +WG+ GY+K+ MG+N+CGV +  S
Sbjct:  240 CKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVP-------YWLIKNSWGADWGDEGYFKMEMGKNMCGVATCAS 355          
The following BLAST results are available for this feature:
BLAST of CF833769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CATC_MOUSE5.989e-1440.91Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATL_SARPE7.822e-1438.66Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATH_BOVIN1.022e-1338.71Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CYSP3_SOLLC2.972e-1337.60Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATL_DROME3.882e-1337.10Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATL1_RAT3.882e-1337.40Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATL1_FELCA3.882e-1337.50Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
ALEU_ARATH3.882e-1334.13Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CATV_NPVHZ5.070e-1335.65Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP2_MAIZE6.622e-1336.00Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833769 ID=CF833769; Name=CF833769; organism=Citrus sinensis; type=EST; length=688bp
TTTTTTTTTTTTTCTAAAAAGAAAATATAACATTATAATATTTCTACAAG
CCTCCTTAATAAAAAAAGAAAATATTAATACCATCTTCAATAACCCTTCT
GTAGCATGGTTAACTATAAAATAGATAAATATTACATTCTGACATGACAT
ATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCCCAGGCAT
GTAGGCATCGTTATAATTGCAGACGGATATTTAAAAGGATATCCTATAAT
ATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAATGTCTAG
CTTGAGGTTGTATGGATAGCAGCTACAGATGAGACCATGGAGTCGACCCC
ACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTCCCCAGT
TCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTTGAATCTG
ATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCACTCCATGATC
CAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATATGTTT
GCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTTCACCAAA
TTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAATTAGATAC
AGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAAC
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