CF833769

Overview
NameCF833769
Unique NameCF833769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = -3
Query:  315 DEDQMAANLVKHGPLAVG--INAVWMQTYIG-----GVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 623
            +E  M   LVKHGP+AV   ++  ++  + G     G+S P+   +  +H VL+VGYG      +      YWI+KNSWG  WGE+GY++I  G + C ++S+  +   I
Sbjct:  355 NEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKDPVTGL-----DYWIVKNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPI 459          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 683
            C++     AA V +F  I   E+ +   + K GP++V ++A     Q Y  G+     C + +L+H VL+VGYG  G          YW++KNSWGE WG  GY KI     N CG+ ++ +
Sbjct:  211 CRYHAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEGEES---DGNSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLAT 329          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 40/122 (32.79%), Postives = 64/122 (52.46%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQTYI--GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 683
            C++D    AA  S ++ +    ED +   +   GP+ VG++A     ++   GV     C + ++HGVL++GYG           K YW++KNSWG N+GE GY ++   + N CG+ S  S
Sbjct:  212 CQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGD-------LNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPS 326          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQTYI--GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 683
            C++D  K AA  S ++ +    ED +   +   GP++V I+A     ++   GV     C + ++HGVL+VGYG+          K YW++KNSWG N+G+ GY ++     N CG+ S  S
Sbjct:  213 CRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGN-------LNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPS 327          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 44/123 (35.77%), Postives = 58/123 (47.15%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 683
            CKF+  K  A V N  ++  +DE  M   +  + P++           Y  GV     C K  D   H VL VGYG             YWI+KNSWG NWG NGY+ I  G+N+CG+ +  S
Sbjct:  212 CKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLL-------YWIVKNSWGSNWGNNGYFLIERGKNMCGLAACAS 327          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSG------------------------------FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 686
            +C F+KS I A +  +  I++  +    N  +HGP++V I+A     Q Y  G+     C    LDHGVL+VGYG  G                                 +R K   YWI+KNSWG +WG  GY  +   R N CG+ S+ S
Sbjct:  220 TCLFNKSDIGATIKGYVNITAGSEISLENGAQHGPVSVAIDASHNSFQLYTSGIYYEPKCSPTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDSSDSVRPKANNYWIVKNSWGTSWGIKGYILMSKDRKNNCGIASVSS 372          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 683
            C++     +A ++++  +  +E  +   +   GP++  I+A     + Y GG+     C  Y ++H VL+VGYGS G          YW+IKNSWGE WG NGY +I     N CG+ S+ S
Sbjct:  211 CRYRSENASANITDYVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVK---DGNNYWLIKNSWGEEWGMNGYMQIAKDHNNHCGIASLAS 329          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 44/124 (35.48%), Postives = 59/124 (47.58%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 686
            SC+F+  K  A V N  ++  +DE  M   +  + P++           Y  GV     C K  D   H VL VGYG             YWI+KNSWG  WGENGY+ I  G+N+CG+ +  S
Sbjct:  211 SCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLL-------YWIVKNSWGSQWGENGYFLIERGKNMCGLAACAS 327          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 43/122 (35.25%), Postives = 62/122 (50.82%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 683
            C++     +A ++ F  +  +E  +   +   GP++  I+A     + Y GGV     C  Y+ +H VL+VGYG  G          YW+IKNSWGE WG NG+ KI   R N CG+ S  S
Sbjct:  211 CRYHSENASANITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSYVVNHAVLVVGYGFEGNET---DGNNYWLIKNSWGEEWGINGFMKIAKDRNNHCGIASQAS 329          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = -3
Query:  330 NFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 644
            N ++ + DE + A  LV+  P++V    +   + Y  GV     CG   D   H VL VGYG     P       YW+IKNSWG +WG+NGY+K+ MG+N+C + +  S
Sbjct:  257 NITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVP-------YWLIKNSWGADWGDNGYFKMEMGKNMCAIATCAS 356          
The following BLAST results are available for this feature:
BLAST of CF833769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CATC_RAT1.129e-1235.45Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
TEST2_MOUSE1.475e-1234.43Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATS_SAIBB1.475e-1232.79Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATS_CANFA1.475e-1233.61Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATH_RAT1.475e-1235.77Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CYSP2_DICDI1.927e-1232.03Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CATJ_MOUSE2.516e-1233.61Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATH_MOUSE2.516e-1235.48Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATJ_RAT3.286e-1235.25Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
ALEU_HORVU3.286e-1237.61Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833769 ID=CF833769; Name=CF833769; organism=Citrus sinensis; type=EST; length=688bp
TTTTTTTTTTTTTCTAAAAAGAAAATATAACATTATAATATTTCTACAAG
CCTCCTTAATAAAAAAAGAAAATATTAATACCATCTTCAATAACCCTTCT
GTAGCATGGTTAACTATAAAATAGATAAATATTACATTCTGACATGACAT
ATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCCCAGGCAT
GTAGGCATCGTTATAATTGCAGACGGATATTTAAAAGGATATCCTATAAT
ATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAATGTCTAG
CTTGAGGTTGTATGGATAGCAGCTACAGATGAGACCATGGAGTCGACCCC
ACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTCCCCAGT
TCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTTGAATCTG
ATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCACTCCATGATC
CAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATATGTTT
GCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTTCACCAAA
TTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAATTAGATAC
AGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAAC
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