CF833769

Overview
NameCF833769
Unique NameCF833769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 686
            SCK++     A  + F  I   E  +   +   GP++V I+A       Y  G+     C    +DHGVL+VGYG   F         YW++KNSWGE WG  GY K+    RN CG+ S  S
Sbjct:  210 SCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGYG---FESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAAS 329          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 38/126 (30.16%), Postives = 67/126 (53.17%), Query Frame = -3
Query:  312 SCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 686
            +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A I+
Sbjct:  206 NCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVIY 323          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = -3
Query:  303 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 620
            E ++   L + GP++V I+ V +  Y  GV+        L+HGVL+VGYG          +  YW +KNSWG +WGE G+++I    N CG+ +  ++ A + ++S
Sbjct:  248 EKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKHCSVDHGLNHGVLLVGYGQEN-------DVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGILNQFAASAILSSSS 346          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = -3
Query:  315 DEDQMAANLVKHGPLAVGI----------NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 623
            +E  M   LV HGPLAV            N ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG +WGE+GY++I  G + C ++S+  +   I
Sbjct:  356 NEALMKLELVYHGPLAVAFEVYDDFLHYQNGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTSWGEDGYFRIRRGTDECAIESIAVAATPI 460          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 41/114 (35.96%), Postives = 58/114 (50.88%), Query Frame = -3
Query:  330 AVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----CGVDSMVS 653
            ++  F  +  ++++     V H P++V I A     Q Y  GV     CG  LDHGV+ VGYG+          K YWI++NSWG  WGE+GY ++    NV    CG+  M S
Sbjct:  249 SIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTSLDHGVVAVGYGTDN-------GKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMAS 354          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 39/125 (31.20%), Postives = 64/125 (51.20%), Query Frame = -3
Query:  312 CKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 683
            C+ + +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL+VGY      P       +WI+KN+WG +WGE GY+++    N CG+ + + S A I+
Sbjct:  208 CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGIM-KYCANHGLNHAVLLVGYAVENGVP-------FWILKNTWGADWGEQGYFRVQQNINACGIQNELPSSAEIY 324          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 46/123 (37.40%), Postives = 61/123 (49.59%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 686
            SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+     C  K LDHGVL+VGYG  G      K   +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  211 SCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNK---FWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 330          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT--YIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 686
            SCK++     A  + F  I   E  +   +   GP++V I+A       Y  G+     C    +DHGVL+VGYG   F         YW++KNSWGE WG  GY K+    RN CG+ S  S
Sbjct:  210 SCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG---FESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAAS 329          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 46/123 (37.40%), Postives = 61/123 (49.59%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 686
            SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+     C  K LDHGVL+VGYG  G      K   +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  211 SCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNK---FWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 330          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 683
            CKF   K  A V + + I+ +DE+ M   +  + P++           Y  G+     C K  D   H VL VGYG     P       YWI+KNSWG  WG NGY+ I  G+N+CG+ +  S
Sbjct:  214 CKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIP-------YWIVKNSWGPQWGMNGYFLIERGKNMCGLAACAS 329          
The following BLAST results are available for this feature:
BLAST of CF833769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CATL1_CERAE4.292e-1235.77Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATV_NPVAC5.606e-1230.16Viral cathepsin OS=Autographa californica nuclear ... [more]
CATV_GVXN5.606e-1233.96Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATC_MACFA5.606e-1234.51Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
ORYB_ORYSJ7.321e-1235.96Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CATV_NPVCF7.321e-1231.20Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATL2_BOVIN7.321e-1237.40Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_HUMAN7.321e-1235.77Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATL1_BOVIN7.321e-1237.40Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATH_PIG7.321e-1234.96Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833769 ID=CF833769; Name=CF833769; organism=Citrus sinensis; type=EST; length=688bp
TTTTTTTTTTTTTCTAAAAAGAAAATATAACATTATAATATTTCTACAAG
CCTCCTTAATAAAAAAAGAAAATATTAATACCATCTTCAATAACCCTTCT
GTAGCATGGTTAACTATAAAATAGATAAATATTACATTCTGACATGACAT
ATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCCCAGGCAT
GTAGGCATCGTTATAATTGCAGACGGATATTTAAAAGGATATCCTATAAT
ATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAATGTCTAG
CTTGAGGTTGTATGGATAGCAGCTACAGATGAGACCATGGAGTCGACCCC
ACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTCCCCAGT
TCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTTGAATCTG
ATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCACTCCATGATC
CAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATATGTTT
GCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTTCACCAAA
TTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAATTAGATAC
AGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAAC
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