CF833769

Overview
NameCF833769
Unique NameCF833769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = -3
Query:  345 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 686
            +C+F+ + I A  + +  I+   +       +  GP++V I+A     Q+Y  GV     C    LDH VL VGYGS G        + +W++KNSW  +WGE+GY K+   R N CG+
Sbjct:  202 TCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEG-------GQDFWLVKNSWATSWGESGYIKMARNRNNNCGI 313          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 38/126 (30.16%), Postives = 66/126 (52.38%), Query Frame = -3
Query:  312 SCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 686
            +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE G++++    N CG+ + ++S A I+
Sbjct:  206 NCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEEGFFRVQQNINACGMRNELASTAVIY 323          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQT--YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-GRNVCGVDSMVS 683
            C ++    AA  S +  +   DED +   +   GP++VGI+A       Y  GV     C   ++HGVL+VGYG+          K YW++KNSWG N+G+ GY ++    +N CG+ S  S
Sbjct:  222 CHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGT-------LDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 336          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 46/123 (37.40%), Postives = 61/123 (49.59%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 686
            SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+     C  K LDHGVL+VGYG  G      K   +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  211 SCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSK---FWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAAS 330          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 40/117 (34.19%), Postives = 60/117 (51.28%), Query Frame = -3
Query:  345 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGV 683
            C++     AA V +F  I   E+ +   + K GP++V ++A     Q Y  G+     C + +L+H VL+VGYG  G          +W++KNSWGE WG  GY K+     N CG+
Sbjct:  211 CRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEGEES---DGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGI 324          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 44/122 (36.07%), Postives = 61/122 (50.00%), Query Frame = -3
Query:  330 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 671
            +S+   ++  F  +  +++      V H P++V I+A     Q Y  GV     CG  LDHGV+ VGYG+            YW ++NSWG +WGENGY  I M RNV      CG+  M S
Sbjct:  258 RSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGR-CGTNLDHGVVAVGYGTDAATGAA-----YWTVRNSWGPDWGENGY--IRMERNVTARTGKCGIAMMAS 371          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = -3
Query:  312 CKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 683
            C+ + +K    V   +  +   E+++   L   GPL V I+A  +  Y  GV   Y     L+H VL+VGY      P       +WI+KN+WG +WGE GY+++    N CG+ + + S A I+
Sbjct:  208 CRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNYKRGV-IRYCANHGLNHAVLLVGYAVENGVP-------FWILKNTWGTDWGEQGYFRVQQNINACGIQNELPSSAEIY 324          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 38/126 (30.16%), Postives = 66/126 (52.38%), Query Frame = -3
Query:  312 SCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 686
            +C+ + +K    V + +  I   E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A I+
Sbjct:  206 NCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVIY 323          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = -3
Query:  330 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 686
            SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+     C  K LDHGVL+VGYG  G          +WI+KNSWG  WG  GY K+   + N CG+ +  S
Sbjct:   97 SCNYKPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG------TNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIATAAS 213          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = -3
Query:  315 DEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 623
            +E  M   LV HGP+AV              ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGENGY++I  G + C ++S+  +   I
Sbjct:  356 NEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPI 460          
The following BLAST results are available for this feature:
BLAST of CF833769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CYSP1_HOMAM9.562e-1234.45Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATV_NPVRO9.562e-1230.16Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATS_MOUSE9.562e-1234.43Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATL1_PIG9.562e-1237.40Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
TEST2_RAT1.249e-1134.19Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CYSP1_ORYSJ1.249e-1136.07Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATV_NPVCD1.249e-1132.00Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATV_NPVBM1.249e-1130.16Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATL1_SHEEP1.249e-1135.77Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATC_HUMAN1.249e-1133.63Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833769 ID=CF833769; Name=CF833769; organism=Citrus sinensis; type=EST; length=688bp
TTTTTTTTTTTTTCTAAAAAGAAAATATAACATTATAATATTTCTACAAG
CCTCCTTAATAAAAAAAGAAAATATTAATACCATCTTCAATAACCCTTCT
GTAGCATGGTTAACTATAAAATAGATAAATATTACATTCTGACATGACAT
ATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCCCAGGCAT
GTAGGCATCGTTATAATTGCAGACGGATATTTAAAAGGATATCCTATAAT
ATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAATGTCTAG
CTTGAGGTTGTATGGATAGCAGCTACAGATGAGACCATGGAGTCGACCCC
ACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTCCCCAGT
TCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTTGAATCTG
ATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCACTCCATGATC
CAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATATGTTT
GCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTTCACCAAA
TTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAATTAGATAC
AGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAAC
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