CF833769

Overview
NameCF833769
Unique NameCF833769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = -3
Query:  315 DEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 623
            +E  M   LV+HGP+AV              ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGE+GY++I  G + C ++S+  +   I
Sbjct:  328 NEALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGSRWGEDGYFRIRRGTDECAIESIAVAATPI 432          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 47/127 (37.01%), Postives = 63/127 (49.61%), Query Frame = -3
Query:  330 CKFDKSKIA-AAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 683
            C+  K  +    +S +  +  ++D+     + H P++V I A     Q Y GGV     CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE G+  I M RN      +CG++ M S
Sbjct:  233 CQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGK-CGTDLDHGVAAVGYGSS-------KGSDYVIVKNSWGPRWGEKGF--IRMKRNTGKPEGLCGINKMAS 349          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = -3
Query:  330 DKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 674
            DKS+    ++ +  +++ E  +   +   GP++  +    M++Y GG+     C G  L HGV +VGYG           + YWIIKN+WG +WGE+GY ++     + CGV+ M S
Sbjct:  210 DKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIEN-------GQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMAS 319          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 42/123 (34.15%), Postives = 57/123 (46.34%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 683
            CKF   K    V + + I+  DE+ M   +  + P++           Y  G+     C K  D   H VL VGYG     P       YWI+KNSWG  WG NGY+ I  G+N+CG+ +  S
Sbjct:  214 CKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIP-------YWIVKNSWGPQWGMNGYFLIERGKNMCGLAACAS 329          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVISSDEDQMAANLV---KHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 683
            C+++K    A V+ +  + S  +    NLV   +   +AV + + +M  Y  G+     C    ++H VL VGYG+ G          YWI+KNSWG  WGE GY ++   R N+CG+ S+ S
Sbjct:  204 CRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESDFMM-YRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTD-------YWIVKNSWGTYWGERGYIRMARNRGNMCGIASLAS 318          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 47/121 (38.84%), Postives = 61/121 (50.41%), Query Frame = -3
Query:  330 DKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGVDSMVS 674
            D+S+      +  V ++DE  +   L  H PL+V I+A     Q Y GGV     CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE GY ++         +CG++ M S
Sbjct:  239 DESETVTINGHQDVPTNDEKSLLKALA-HQPLSVAIDASGREFQFYSGGVFDGR-CGVDLDHGVAAVGYGSS-------KGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMAS 350          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = -3
Query:  312 CKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 683
            C+ + +K    V   +  ++  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL+VGYG     P       +WI+KN+WG +WGE GY+++    N CG+ + + S A I+
Sbjct:  208 CRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGI-IRYCENHGLNHAVLLVGYGVENGIP-------FWILKNTWGADWGEQGYFRVQQNINACGIKNELPSSAEIY 324          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = -3
Query:  345 SCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 686
            +C++D   I A VS++    S DE  +   +   GP++V I+A      +Y GGV     C   Y +H V  VGYG+            YWI+KNSWG  WGE+GY K+   R N C +
Sbjct:  202 NCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAI 314          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 40/123 (32.52%), Postives = 64/123 (52.03%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQT---YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-GRNVCGVDSMVS 683
            C +D    AA  S +  +   DE+ +   +   GP++VGI+     +   Y  GV     C + ++HGVL+VGYG+          K YW++KNSWG ++G+ GY ++    +N CG+ S  S
Sbjct:  211 CLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGT-------LDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCS 326          
BLAST of CF833769 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = -3
Query:  330 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 683
            C++     AA  + F  I    ++     V   GP++V I+A     Q Y  G+     C    LDHGVL+VGYG  G        K YWI+KNSWGE WG+ GY  +   R N CG+ +  S
Sbjct:   99 CRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEG-------GKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 214          
The following BLAST results are available for this feature:
BLAST of CF833769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CATC_CANFA1.249e-1132.74Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
XCP1_ARATH1.631e-1137.01Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CATLL_PHACE1.631e-1132.48Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATH_HUMAN1.631e-1134.15Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATLL_FASHE2.782e-1133.33Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
XCP2_ARATH3.633e-1138.84Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CATV_NPVAP3.633e-1131.20Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CRUST_PANBO4.745e-1136.13Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATS_RAT4.745e-1132.52Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATL1_CHICK4.745e-1136.59Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833769 ID=CF833769; Name=CF833769; organism=Citrus sinensis; type=EST; length=688bp
TTTTTTTTTTTTTCTAAAAAGAAAATATAACATTATAATATTTCTACAAG
CCTCCTTAATAAAAAAAGAAAATATTAATACCATCTTCAATAACCCTTCT
GTAGCATGGTTAACTATAAAATAGATAAATATTACATTCTGACATGACAT
ATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCCCAGGCAT
GTAGGCATCGTTATAATTGCAGACGGATATTTAAAAGGATATCCTATAAT
ATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAATGTCTAG
CTTGAGGTTGTATGGATAGCAGCTACAGATGAGACCATGGAGTCGACCCC
ACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTCCCCAGT
TCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTTGAATCTG
ATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCACTCCATGATC
CAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATATGTTT
GCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTTCACCAAA
TTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAATTAGATAC
AGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAAC
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