CF833770

Overview
NameCF833770
Unique NameCF833770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 70/253 (27.67%), Postives = 106/253 (41.90%), Query Frame = 1
Query:   22 LPTDFDCRDHGA----VTGVKDQGACGSCWSFSATGALEGAHFLST--GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE-------KDYPYTGTDGGSCKFDK------------SKIAAAVSNFSV----ISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD-HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 687
            +P  FD R   +    +  ++DQ  CGSCW+F A   +     + T   +   +S   L+ C   C      SC +GC GG    A  +    G V          K YP      G+C   K            S   A   +F V    +  +   + A +  +GP+    +       Y  GV   +  GKYL  H + I+G+G+   +P       YW++ NSWG NWGE+G++KI  G + CG++S V
Sbjct:   85 VPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLLSC---C----GSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHGAGCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVY-KHTAGKYLGGHAIKIIGWGTESGSP-------YWLVANSWGVNWGESGFFKIYRGDDQCGIESAV 322          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 68/233 (29.18%), Postives = 97/233 (41.63%), Query Frame = 1
Query:   25 PTDFDCRDH--GAVTGVKDQGACGSCWSFSATGALEGAHFLS--TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG--GSCKF---DKSKIAAAVSNFSVISSDEDQMAAN--LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLD-HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 687
            P  FD R+     +  V DQG CGSCW+FS+  ++      +    + V  S Q +V CD           D  C+GG + S + ++ K G    E     +G+ G  G+C     D S +         +    D  A    L   GPL           Y       +  G+    H V +VGYG+            YWIIKNSWG +WGE+GY++I    N CG++  V
Sbjct:   75 PDSFDFREEYPHCIPEVVDQGGCGSCWAFSSVASVGDRRCFAGLDKKAVKYSPQYVVSCDRG---------DMACDGGWLPSVWRFLTKTGTTTDECVPYQSGSTGARGTCPTKCADGSDLPHLYKATKAVDYGLDAPAIMKALATGGPLQTAFTVYSDFMYYESGVYQHTYGRVEGGHAVDMVGYGTDDDGV------DYWIIKNSWGPDWGEDGYFRIIRMTNECGIEEQV 292          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATZ_HUMAN (Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 67/238 (28.15%), Postives = 111/238 (46.64%), Query Frame = 1
Query:    4 FLPTNDLPTDFDCRDHGAVTGV---KDQGA---CGSCWSFSATGAL-EGAHFLSTGELVS--LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS------KIAAAVSNFSVIS-------SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 648
            +L   DLP  +D R+   V      ++Q     CGSCW+ ++T A+ +  +    G   S  LS Q ++DC +      +GSC+ G +  + + A ++     G+  E    Y   D    KF++       K   A+ N+++         S  ++M A +  +GP++ GI A   +  Y GG+   Y    Y++H V + G+G S           YWI++NSWGE WGE G+ +I
Sbjct:   56 YLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN------AGSCEGGNDLSVWDYAHQH-----GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTE-------YWIVRNSWGEPWGERGWLRI 275          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATZ_BOVIN (Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 66/238 (27.73%), Postives = 106/238 (44.54%), Query Frame = 1
Query:    4 FLPTNDLPTDFDCRDHGAV---TGVKDQGA---CGSCWSFSATGAL-EGAHFLSTGELVS--LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-------------SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 648
            +L  +DLP  +D R+   V   +  ++Q     CGSCW+  +T A+ +  +    G   S  LS Q ++DC       ++GSC+ G +  +   A  +     G+  E    Y   D    KF++           VI              S  ++M A +  +GP++ GI A   M  Y GG+   Y    +++H V + G+G S           YWI++NSWGE WGE+G+ +I
Sbjct:   57 YLSPSDLPKSWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSAMADRINIKRKGAWPSTLLSVQHVIDCG------DAGSCEGGNDLPVWEYAHRH-----GIPDETCNNYQAKDQECDKFNQCGTCTEFKECHVIKNYTLWKVGDYGSLSGREKMMAEIYTNGPISCGIMATEKMSNYTGGIYSEYNDQAFINHIVSVAGWGVSD-------GMEYWIVRNSWGEPWGEHGWMRI 276          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 69/238 (28.99%), Postives = 109/238 (45.80%), Query Frame = 1
Query:    4 FLPTNDLPTDFDCRDHGAV---TGVKDQGA---CGSCWSFSATGAL-EGAHFLSTGELVS--LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS------KIAAAVSNFSVIS-------SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 648
            +L   DLP ++D R+   V   +  ++Q     CGSCW+  +T AL +  +    G   S  LS Q ++DC +      +GSC+    GG     +EY  K G +  E    Y   D    KF++       K    + N+++         S  ++M A +  +GP++ GI A   M  Y GG+   Y     ++H + + G+G S           YWI++NSWGE WGE G+ +I
Sbjct:   58 YLSPADLPKNWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSALADRINIKRKGAWPSTLLSVQNVIDCGN------AGSCE----GGNDLPVWEYAHKHG-IPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERMSNYTGGIYTEYQNQAIINHIISVAGWGVSNDGI------EYWIVRNSWGEPWGERGWMRI 278          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 67/238 (28.15%), Postives = 109/238 (45.80%), Query Frame = 1
Query:    4 FLPTNDLPTDFDCRDHGAV---TGVKDQGA---CGSCWSFSATGAL-EGAHFLSTGELVS--LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS------KIAAAVSNFSVIS-------SDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 648
            +L   DLP ++D R+   V   +  ++Q     CGSCW+  +T A+ +  +    G   S  LS Q ++DC +      +GSC+    GG     +EY  K G +  E    Y   D    KF++       K    + N+++         S  ++M A +  +GP++ GI A   M  Y GG+   +     ++H + + G+G S           YWI++NSWGE WGE G+ +I
Sbjct:   58 YLSPADLPKNWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSAMADRINIKRKGAWPSILLSVQNVIDCGN------AGSCE----GGNDLPVWEYAHKHG-IPDETCNNYQAKDQDCDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATEMMSNYTGGIYAEHQDQAVINHIISVAGWGVSNDGI------EYWIVRNSWGEPWGEKGWMRI 278          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: TINAL_HUMAN (Tubulointerstitial nephritis antigen-like OS=Homo sapiens GN=TINAGL1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11
Identity = 73/269 (27.14%), Postives = 110/269 (40.89%), Query Frame = 1
Query:   10 PTNDLPTDFDCRDH--GAVTGVKDQGACGSCWSFS-ATGALEGAHFLSTGELVS-LSEQQLVDCD-HECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS------CKFD-------KSKIAAAVSNFSV-------------ISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGV--SCPYICGK---YLDHG---VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 696
            P   LPT F+  +     +    DQG C   W+FS A  A +     S G +   LS Q L+ CD H+           GC GG ++ A+ + L+  GV  +  YP++G +         C          K +  A   N  V             + S++ ++   L+++GP+   +        Y GG+    P   G+   Y  HG   V I G+G       R  +  YW   NSWG  WGE G+++I  G N C ++S V  V
Sbjct:  199 PGEVLPTAFEASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPVLSPQNLLSCDTHQ---------QQGCRGGRLDGAW-WFLRRRGVVSDHCYPFSGRERDEAGPAPPCMMHSRAMGRGKRQATAHCPNSYVNNNDIYQVTPVYRLGSNDKEIMKELMENGPVQALMEVHEDFFLYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLK--YWTAANSWGPAWGERGHFRIVRGVNECDIESFVLGV 455          
The following BLAST results are available for this feature:
BLAST of CF833770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
CPR1_CAEEL9.472e-1827.67Gut-specific cysteine proteinase OS=Caenorhabditis... [more]
CATB3_GIALA1.786e-1629.18Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
CATZ_HUMAN2.580e-1528.15Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1[more]
CATZ_BOVIN5.747e-1527.73Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2[more]
CATZ_RAT3.725e-1428.99Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
CATZ_MOUSE8.298e-1428.15Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]
TINAL_HUMAN1.014e-1127.14Tubulointerstitial nephritis antigen-like OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833770 ID=CF833770; Name=CF833770; organism=Citrus sinensis; type=EST; length=707bp
CTGTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGCCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGT
ATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATA
CATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGGAT
CCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCATA
AAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATCTG
CATGGGTCGCAATGTCTGTGGCGTCGACTCCATGGTCTCATCTGTAGCTG
CTATCCA
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