CF833770

Overview
NameCF833770
Unique NameCF833770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.080e-45
Identity = 103/227 (45.37%), Postives = 130/227 (57.27%), Query Frame = 1
Query:   25 PTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 690
            P   D R+ G VT VKDQG CGSCW+FS TGALEG HF + G+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+   GG++ E+ YPYT  D   C++     AA  + F  I    ++     V   GP++V I+A     Q Y  G+   P    + LDHGVL+VGYG  G        K YWI+KNSWGE WG+ GY  +   R N CG+ +  S
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSR---PEG----NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEG-------GKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 214          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.329e-45
Identity = 103/233 (44.21%), Postives = 135/233 (57.94%), Query Frame = 1
Query:   13 TNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 693
            T   P   D R+ GAVT VK QG CGSCW+FS  G +EG   ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y GG+  SC     K LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  G N C ++  VSS
Sbjct:  123 TGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGILTSC---TSKQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSS 336          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.960e-45
Identity = 100/228 (43.86%), Postives = 130/228 (57.02%), Query Frame = 1
Query:   19 DLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 690
            ++P   D R+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+Y+   GG++ E+ YPY G +  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  113 EVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG---TDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAAS 330          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 6.960e-45
Identity = 102/228 (44.74%), Postives = 128/228 (56.14%), Query Frame = 1
Query:   19 DLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 690
            D+P   D    G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI   GG++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  113 DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG---TDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 330          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.187e-44
Identity = 101/224 (45.09%), Postives = 126/224 (56.25%), Query Frame = 1
Query:   22 LPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDS 681
            +  D D R    VT VKDQ  CGSCW+FSATGALEG HFL   ELVSLSEQQLVDC  +         + GC GG M SAF+YI   GG++ E  YPY   D  SC+FD + I A  +    +   E+ +   +   GP++V I+A     Q Y  GV     C   +LDHGVL VGYG+          K YW++KNSWG +WG+ GY K+   R N CG+ S
Sbjct:  106 MAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYG-------NDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED-RSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTE-------STKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIAS 314          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.645e-44
Identity = 103/227 (45.37%), Postives = 126/227 (55.51%), Query Frame = 1
Query:   25 PTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 693
            P   D R  GAVT VKDQG CGSCW+FSA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++   G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV ++A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNSW   WGE GY +I  G N C V    SS
Sbjct:  124 PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD---------KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASS 333          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.454e-44
Identity = 99/228 (43.42%), Postives = 129/228 (56.58%), Query Frame = 1
Query:   19 DLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 690
            ++P   D R+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF Y+   GG++ E+ YPY G D  +C +     AA  + F  +   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  113 EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEG----TDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 329          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.695e-44
Identity = 101/228 (44.30%), Postives = 127/228 (55.70%), Query Frame = 1
Query:   19 DLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 690
            D+P   D    G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI   G ++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  113 DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG---TDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 330          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.005e-43
Identity = 97/228 (42.54%), Postives = 130/228 (57.02%), Query Frame = 1
Query:   16 NDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGV 675
            +++P   D R  GAV  +KDQG CGSCW+FS   A+EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY GT+G      K+     +  +  + S ++      V + P++V I+A     Q Y  G+     CG  +DH V+ VGYGS            YWI++NSWG  WGE+GY  I M RNV      CG+
Sbjct:   98 DEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK-CGTNMDHAVVAVGYGSENGV-------DYWIVRNSWGTRWGEDGY--IRMERNVASKSGKCGI 307          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.005e-43
Identity = 101/227 (44.49%), Postives = 128/227 (56.39%), Query Frame = 1
Query:   10 PTNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 675
            PT  +  D D R+ GAVT VKDQG CGSCW+FSA  ALEGAHFL TG+LVSLSEQ LVDC        S   + GCNGG    A++YI+   G++ E  YPY   D  +C++D   I A VS++    S DE  +   +   GP++V I+A      +Y GGV     C   Y +H V  VGYG+            YWI+KNSWG  WGE+GY K+   R N C +
Sbjct:  102 PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDC-------SSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAID-DNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAI 314          
The following BLAST results are available for this feature:
BLAST of CF833770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
CATL1_CHICK4.080e-4545.37Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CYSP_TRYBB5.329e-4544.21Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATL1_PIG6.960e-4543.86Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_BOVIN6.960e-4544.74Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CYSP3_HOMAM1.187e-4445.09Digestive cysteine proteinase 3 OS=Homarus america... [more]
CYSP_TRYCR2.645e-4445.37Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATL1_CANFA3.454e-4443.42Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL2_BOVIN7.695e-4444.30Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CYSP4_BRANA1.005e-4342.54Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CRUST_PANBO1.005e-4344.49Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833770 ID=CF833770; Name=CF833770; organism=Citrus sinensis; type=EST; length=707bp
CTGTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGCCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGT
ATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATA
CATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGGAT
CCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCATA
AAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATCTG
CATGGGTCGCAATGTCTGTGGCGTCGACTCCATGGTCTCATCTGTAGCTG
CTATCCA
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