CF833770

Overview
NameCF833770
Unique NameCF833770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.963e-41
Identity = 83/213 (38.97%), Postives = 125/213 (58.69%), Query Frame = 1
Query:   16 NDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 648
            + LP   D R+ G + GVKDQG+CGSCW+FSA  A+E  + + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+++K GG++ E+DYPY   +G   ++ K+     + ++  +  + ++     V H P+++ + A     Q Y  G+     CG  +DHGV+I GYG+            YWI++NSWG N  ENGY ++
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGK-CGTAVDHGVVIAGYGTE-------NGMDYWIVRNSWGANCRENGYLRV 212          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.963e-41
Identity = 87/236 (36.86%), Postives = 135/236 (57.20%), Query Frame = 1
Query:   10 PTNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 705
            P +  P  FD R+   VT +K+QGACG+CW+F+   ++E    +    L+ LSEQQL+DCD         S D GCNGGL+++AFE I++ GGV+ E DYP+ G +   C  D+ +  + + V  +  +  +E+++   L   GP+ + I+A  +  Y  GV  SC       L+H VL+VGYG            PYW+ KN+WG++WGENGY+++    N CG+ + ++S A +
Sbjct:  140 PPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRN-RRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGV-------PYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVL 355          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.963e-41
Identity = 88/233 (37.77%), Postives = 132/233 (56.65%), Query Frame = 1
Query:   10 PTNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 705
            P    P +FD R    VT VK+QG CG+CW+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A I
Sbjct:  108 PPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 7.963e-41
Identity = 95/231 (41.13%), Postives = 130/231 (56.28%), Query Frame = 1
Query:   10 PTNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 690
            P   LP   D R+ G VT VK QG+CG+CW+FSA GALE    L TG+LVSLS Q LVD    C  E+ G  + GCNGG M +AF+YI+   G++ +  YPY   D   C++D    AA  S ++ +    ED +   +   GP++VG++A       Y  GV     C + ++HGVL+VGYG           K YW++KNSWG N+GE GY ++   + N CG+ S  S
Sbjct:  111 PNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGD-------LNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPS 327          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.358e-40
Identity = 89/233 (38.20%), Postives = 130/233 (55.79%), Query Frame = 1
Query:   10 PTNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 705
            P    P +FD R    +T VK+QG CG+CW+F+   +LE    ++   L++LSEQQ++DCD         S D GC GGL+++AFE I+  GGV+ E DYPY  ++   C+ D +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL+VGYG            PYWI+KNSWG +WGE G++KI    N CG+ + ++S A I
Sbjct:  108 PPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSN-NYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGI-IKYCANNGLNHAVLLVGYGVE-------NNVPYWILKNSWGTDWGEQGFFKIQQNVNACGIKNELASTAEI 322          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40
Identity = 96/238 (40.34%), Postives = 131/238 (55.04%), Query Frame = 1
Query:    1 LFLPTNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 690
            ++     +P   D R  GAVT VKDQG CGSCW+FS   A+EG + + T +LVSLSEQ+LVDCD E         + GCNGGLM SAFE+I + GG+  E +YPYT  +G   +   + +A ++     +  +++      V + P++V I+A     Q Y  GV     C   L+HGV IVGYG++           YWI++NSWG  WGE GY  I M RN+      CG+  M S
Sbjct:  121 MYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCNTDLNHGVAIVGYGTT------VDGTNYWIVRNSWGPEWGEQGY--IRMQRNISKKEGLCGIAMMAS 341          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40
Identity = 93/226 (41.15%), Postives = 125/226 (55.31%), Query Frame = 1
Query:   10 PTNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 675
            P   LP   D R+ G VT VK QGACGSCW+FSA GALE    L TG+LVSLS Q LVDC        +   + GCNGG M  AF+YI+   G++ E  YPY   D G C++D    AA  S +  +    E+ +   +   GP++VGI+A       Y  GV     C + ++HGVL+VGYG+          K YW++KNSWG ++G+ GY ++     N CG+
Sbjct:  111 PNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDC------STAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD-GKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGN-------LDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGI 322          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.952e-40
Identity = 95/219 (43.38%), Postives = 122/219 (55.71%), Query Frame = 1
Query:   37 DCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 675
            D R  GAVTGVKDQG CGSCW+FS   ++EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AFE+I K  G+  E  YPY   DG       +    ++     + ++ +      V + P++V I A     Q Y  GV     CG  LDHGV IVGYG++           YWI+KNSWGE WGE+GY ++  G    R  CG+
Sbjct:  135 DWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIQK-NGITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGR-CGTELDHGVAIVGYGATR------DGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGI 337          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.952e-40
Identity = 86/233 (36.91%), Postives = 132/233 (56.65%), Query Frame = 1
Query:   10 PTNDLPTDFDCRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 705
            P    P +FD R    VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A I
Sbjct:  108 PPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322          
BLAST of CF833770 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.952e-40
Identity = 101/233 (43.35%), Postives = 129/233 (55.36%), Query Frame = 1
Query:   13 TNDLPTDFDCRDHGA-VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPL--AVGINAVWMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 690
            T   P   D R  G  VT VK+QG+CGSCW+FS TGALE A  ++TG+L  L+EQQLVDC    +       + GC GGL + AFEYI    G+  E  YPY G D G CK+  SK  A V + + I+ +DE+ M   +  H P+  A  + A +M  Y  G+     C K  D   H VL VGYG         K  PYWI+KNSWG NWG  GY+ I  G+N+CG+ +  S
Sbjct:  113 TGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQD-GDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------KGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACAS 329          
The following BLAST results are available for this feature:
BLAST of CF833770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
CYSPL_SOLLC7.963e-4138.97Low-temperature-induced cysteine proteinase (Fragm... [more]
CATV_NPVLD7.963e-4136.86Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVBM7.963e-4137.77Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATS_HUMAN7.963e-4141.13Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATV_NPVEP1.358e-4038.20Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CYSEP_VIGMU3.026e-4040.34Vignain OS=Vigna mungo PE=1 SV=1[more]
CATS_BOVIN3.026e-4041.15Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CYSP_HEMSP3.952e-4043.38Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CATV_NPVAC3.952e-4036.91Viral cathepsin OS=Autographa californica nuclear ... [more]
CATH_BOVIN3.952e-4043.35Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04D18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833770 ID=CF833770; Name=CF833770; organism=Citrus sinensis; type=EST; length=707bp
CTGTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGCCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGT
ATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATA
CATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGGAT
CCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCATA
AAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATCTG
CATGGGTCGCAATGTCTGTGGCGTCGACTCCATGGTCTCATCTGTAGCTG
CTATCCA
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