CF833774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_HALSA (50S ribosomal protein L14P OS=Halobacterium salinarium GN=rpl14p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.594e-16 Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P A +GD + +V KG P++ ++V+ AV+VRQRKP R DG + FEDNA VI++ GE +G+ I GPI +E A+ + IAS A IV Sbjct: 45 PKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132 HSP 2 Score: 21.9422 bits (45), Expect = 2.594e-16 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 68 GLPVAATVNCADNTEGKE 121 GL + + CADNT +E Sbjct: 11 GLEKGSLITCADNTGARE 28
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.594e-16 Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P A +GD + +V KG P++ ++V+ AV+VRQRKP R DG + FEDNA VI++ GE +G+ I GPI +E A+ + IAS A IV Sbjct: 45 PKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132 HSP 2 Score: 21.9422 bits (45), Expect = 2.594e-16 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 68 GLPVAATVNCADNTEGKE 121 GL + + CADNT +E Sbjct: 11 GLEKGSLITCADNTGARE 28
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_METBF (50S ribosomal protein L14P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl14p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.010e-15 Identity = 41/88 (46.59%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P A +GDM + +VKKG P++ K+V+ AV+VRQ++ +R DG+ + FEDNA VI + +G KG+ I GPI +E A+ +P I + A+ IV Sbjct: 45 PCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLRVSFEDNAMVITDEEGIPKGTDIKGPIAREVAERYPKIGTTASIIV 132
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_METAC (50S ribosomal protein L14P OS=Methanosarcina acetivorans GN=rpl14p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.010e-15 Identity = 40/88 (45.45%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P A +GDM + +VKKG P++ K+V+ AV+VRQ++ +R DG+ + FEDNA VI + +G KG+ I GP+ +E A+ +P I + A+ IV Sbjct: 45 PCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_METB6 (50S ribosomal protein L14P OS=Methanoregula boonei (strain 6A8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15 Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P +GD+ TVKKG PD+ KK++ AV++RQ+K R +G+ + F+DNA V+V+ K E KG+ I GP+ +E A+ +P + S A IV Sbjct: 45 PKMGLGDIATVTVKKGTPDMRKKLVRAVVIRQKKEMRRPNGLRVSFDDNAVVVVDEKNEPKGTEIKGPVAREVAERYPKLGSMATIIV 132
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_HALMA (50S ribosomal protein L14P OS=Haloarcula marismortui GN=rpl14p PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.647e-15 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P A +GD + +V KG P++ ++V+ AV+VRQRKP R DG + FEDNA VIV+ + +G+ + GPI +E A + +ASAA IV Sbjct: 45 PKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV 132 HSP 2 Score: 21.9422 bits (45), Expect = 4.647e-15 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 68 GLPVAATVNCADNTEGKE 121 GL + + CADNT +E Sbjct: 11 GLEKGSLITCADNTGARE 28
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_NATPD (50S ribosomal protein L14P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl14p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.647e-15 Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P A +GD + +V KG P++ ++V+ AV++RQRKP R DG + FEDNA VIV+ + +G+ + GPI +E A+ + IAS A IV Sbjct: 45 PKAGLGDKITVSVTKGTPEMRRQVLEAVVIRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAERFGSIASTATIIV 132 HSP 2 Score: 22.7126 bits (47), Expect = 4.647e-15 Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 2 Query: 50 NFRMSLGLPVAATVNCADNTEGKE 121 N ++ GL + + CADNT +E Sbjct: 5 NADVTQGLEKGSLITCADNTGARE 28
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_HALLT (50S ribosomal protein L14P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl14p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 6.040e-15 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P A +GD V +V KG P++ ++V+ AV+VRQRKP R +G + FEDNA VI++ E +G+ I GP+ +E A+ + IAS A IV Sbjct: 45 PKAGIGDKVTVSVTKGTPEMRRQVLEAVVVRQRKPIRRPNGTRVKFEDNAAVIIDDLDEPRGTEIKGPVAREVAERFGSIASTATMIV 132 HSP 2 Score: 21.9422 bits (45), Expect = 6.040e-15 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 68 GLPVAATVNCADNTEGKE 121 GL + + CADNT +E Sbjct: 11 GLSKGSLITCADNTGARE 28
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_METMA (50S ribosomal protein L14P OS=Methanosarcina mazei GN=rpl14p PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.706e-15 Identity = 39/88 (44.32%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 172 PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 P A +GDM + +VKKG P++ K+++ AV+VRQ++ +R DG+ + FEDNA VI + G KG+ I GP+ +E A+ +P I + A+ IV Sbjct: 45 PCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEDGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132
BLAST of CF833774 vs. ExPASy Swiss-Prot
Match: RL14_HALWD (50S ribosomal protein L14P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl14p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 49/126 (38.89%), Postives = 67/126 (53.17%), Query Frame = 1 Query: 58 DVTGFASGSNCELC*QH*GQRTFTSSQLRESKVASTV*PSACVGDMVMATVKKGKPDLMKKVMPAVIVRQRKPWRIKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPIIASAANAIV 435 DVT + C + G R + S P A +GD V +V KG P++ ++V+ AVIVRQRK R DG + FEDNA VI++ E +G+ I GPI +E A+ + IAS A IV Sbjct: 7 DVTKGLERGSLVTCADNTGARELKVISVMGSSGTKNRHPKAGIGDQVTVSVTKGTPEMRRQVLEAVIVRQRKSIRRPDGTRVKFEDNAAVIIDEMEEPRGTEIKGPIAREVAERFGSIASTATMIV 132 The following BLAST results are available for this feature:
BLAST of CF833774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833774 ID=CF833774; Name=CF833774; organism=Citrus sinensis; type=EST; length=667bpback to top |