CF833809

Overview
NameCF833809
Unique NameCF833809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.701e-78
Identity = 143/190 (75.26%), Postives = 162/190 (85.26%), Query Frame = -3
Query:  152 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPI 721
            GP+++HLDSLVGQALF           DPD  VERPL+QLVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI ++L +A  PLGISDWN IFW+AHPGGPAILDQVE+K+GL   +++ATR VLSEYGNMSSACVLFILD+MRK+S E+ +A  GEGLDWGVL GFGPGLTVETVVLHSVPI
Sbjct:  204 GPSESHLDSLVGQALFGDGAAAVVVGADPDDRVERPLFQLVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.701e-78
Identity = 146/188 (77.66%), Postives = 159/188 (84.57%), Query Frame = -3
Query:  158 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSV 721
            GP+DTHLDSLVGQALF           DP   VE+PL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL+EA  PLGISDWN +FWIAHPGGPAILDQVE K+GLK EKL+ATR VLSEYGNMSSACVLFILD+MRKKS  +     GEGL+WGVL GFGPGLTVETVVLHS+
Sbjct:  200 GPSDTHLDSLVGQALFGDGAAAIIVGSDPIPEVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLAEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAADGLKTTGEGLEWGVLFGFGPGLTVETVVLHSL 387          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.950e-78
Identity = 144/190 (75.79%), Postives = 160/190 (84.21%), Query Frame = -3
Query:  152 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPI 721
            GP DTHLDSLVGQALF           DP   VE+PL++LVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKN+EKSL+EA  PLGISDWN +FWIAHPGGPAILDQVE+K+ LK EKL+ATR VLSEYGNMSSACVLFILD+MR+KS E+     GEG++WGVL GFGPGLTVETVVLHSV I
Sbjct:  200 GPTDTHLDSLVGQALFGDGAAAIIIGSDPIPEVEKPLFELVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGIEWGVLFGFGPGLTVETVVLHSVAI 389          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 6.465e-78
Identity = 146/188 (77.66%), Postives = 159/188 (84.57%), Query Frame = -3
Query:  158 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSV 721
            GP+DTHLDS+VGQALF           DP   VERPL++LVS +QT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  PLGISDWN IFWIAHPGGPAILDQVE K+ LK EKL+ATRQVLS+YGNMSSACVLFILD+MRK S +E  +  GEGLDWGVL GFGPGLTVETVVLHSV
Sbjct:  200 GPSDTHLDSMVGQALFGDRAAAMIIGSDPLPEVERPLFELVSAAQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLIEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLSLKPEKLRATRQVLSDYGNMSSACVLFILDEMRKASSKEGLSTTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.465e-78
Identity = 140/192 (72.92%), Postives = 160/192 (83.33%), Query Frame = -3
Query:  146 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPIQA 721
            GP ++HLDSLVGQALF           DPD S+ERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE++L +A  PLGI DWN +FWIAHPGGPAILD VE+K+ L  E+++ATR VLSEYGNMSSACVLFI+D+MRK+S E+     GEG+DWGVL GFGPGLTVETVVLHSVP+ A
Sbjct:  203 GPHESHLDSLVGQALFGDGAAAVIIGADPDESIERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVPVTA 394          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77
Identity = 147/188 (78.19%), Postives = 157/188 (83.51%), Query Frame = -3
Query:  158 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSV 721
            GP DTHLDSLVGQALF           DP   VERPL++LVS SQT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+KSL EA  PLGISDWN IFWIAHPGGPAILDQVE K+GLK EKL+ATR VLSEYGNMSSACVLFILD+MRK S +E     GEGL+WGVL GFGPGLTVETVVLHSV
Sbjct:  200 GPNDTHLDSLVGQALFGDGAAAIIIGSDPLPGVERPLFELVSASQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKSLVEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77
Identity = 146/188 (77.66%), Postives = 156/188 (82.98%), Query Frame = -3
Query:  158 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSV 721
            GP DTHLDSLVGQALF           DP   VERPL++LVS +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  PLGISDWN +FWIAHPGGPAILDQVE K+GLK EKLKATR VLS+YGNMSSACVLFILD+MRK S +E     GEGL+WGVL GFGPGLTVETVVLHSV
Sbjct:  200 GPNDTHLDSLVGQALFGDGAGAIIIGSDPIPGVERPLFELVSAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKPEKLKATRNVLSDYGNMSSACVLFILDEMRKASAKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77
Identity = 141/190 (74.21%), Postives = 162/190 (85.26%), Query Frame = -3
Query:  152 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPI 721
            GP+++HLDS+VGQALF           DPD  VERPL+QLVS SQ ILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE++L EA  PLGI+D+N IFW+AHPGGPAILDQVE+K+GL+ E+++ATR VLSEYGNMSSACVLFILD+MRK+S E+ +   GEG DWGVL GFGPGLTVETVVLHSVPI
Sbjct:  204 GPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQRILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQTTTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77
Identity = 145/188 (77.13%), Postives = 158/188 (84.04%), Query Frame = -3
Query:  158 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSV 721
            GP+DTHLDSLVGQALF           DP   VE+PL+++VST+QTILPDSDGAIDGHLREVG+TFHLLKDVPGLISKNIEKSL EA  PLGISDWN +FWIAHPGGPAILDQVE K+ LK EKL ATR VLSEYGNMSSACVLFILD+MR+KS E+     GEGLDWGVL GFGPGLTVETVVLHS+
Sbjct:  200 GPSDTHLDSLVGQALFGDGAAAIIVGADPLPEVEKPLFEVVSTAQTILPDSDGAIDGHLREVGVTFHLLKDVPGLISKNIEKSLVEAFQPLGISDWNSLFWIAHPGGPAILDQVEEKLALKPEKLGATRHVLSEYGNMSSACVLFILDEMRRKSAEKGLKTTGEGLDWGVLFGFGPGLTVETVVLHSL 387          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS1_MAIZE (Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.457e-77
Identity = 140/190 (73.68%), Postives = 161/190 (84.74%), Query Frame = -3
Query:  152 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPI 721
            GP+++H+DSLVGQALF           DPD  VERPL+QLVS +QTILPDS+GAIDGHLREVGL FHLLKDVPGLISKNIE++L +A  PLGISDWN IFW+AHPGGPAILDQVE+K+GL   +++ATR VLSEYGNMSSACVLFILD+MRK+  E+ ++  GEGLDWGVL GFGPGLTVETVVLHSVPI
Sbjct:  203 GPSESHVDSLVGQALFGDGAAAGRGGADPDGRVERPLFQLVSAAQTILPDSEGAIDGHLREVGLAFHLLKDVPGLISKNIERALEDAFEPLGISDWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRPAEDGQSTTGEGLDWGVLFGFGPGLTVETVVLHSVPI 392          
The following BLAST results are available for this feature:
BLAST of CF833809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
CHS2_MAIZE1.701e-7875.26Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHS1_CAMSI1.701e-7877.66Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_HYPAN4.950e-7875.79Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHS2_SOLLC6.465e-7877.66Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHS2_SECCE6.465e-7872.92Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHSJ_PETHY1.103e-7778.19Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHSA_PETHY1.103e-7777.66Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS1_SORBI1.103e-7774.21Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHS1_CASGL1.103e-7777.13Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]
CHS1_MAIZE2.457e-7773.68Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04E24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833809 ID=CF833809; Name=CF833809; organism=Citrus sinensis; type=EST; length=726bp
GGTGAGGTCATAAGATAAAAGGCTCGATGCCTTAAAGTCAATTGACAAAA
CTAAACCTTCGCACGATCAACCAATAACTCAACTGTGAAAGCATACAACA
TAAAGTTACTGAACTACTACACATACTGATGGAGCTCTCAGTTCAAGCTT
GGATGGGGACACTGTGCAACACAACGGTCTCGACGGTGAGCCCCGGCCCG
AACCCTAACAACACACCCCAATCGAGCCCTTCCCCGGGGGGGGCTTTCGC
TTCCTCAACAGACTTCTTTCTCATATCGTCAAGGATGAACAAGACACAAG
CGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCAGC
TTCTCCCCTTTGAGGCCCATTTTAGACTCCACTTGGTCCAGAATTGCGGG
CCCACCGGGGTGAGCGATCCAGAATATCTAGTTCCAGTCGCTGATGCCAA
GCGGGGCTAACGCTTCAGACAGGCTTTTCTCTATATTCTTTGAGATCAAG
CCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAGTG
TCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGACA
CGAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGCACCCACT
ATCACAGCAGCAGCACCATCACCGAACAAAGCCTGGCCCACTAGAGAATC
AAGATGAGTATCGGCAGGGCCGCAGA
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