CF833911

Overview
NameCF833911
Unique NameCF833911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833911 vs. ExPASy Swiss-Prot
Match: ST6B1_HUMAN (Sulfotransferase 6B1 OS=Homo sapiens GN=SULT6B1 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.110e-16
Identity = 61/196 (31.12%), Postives = 99/196 (50.51%), Query Frame = -3
Query:  125 SPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHFTNKLRPEEKGTNSLEETFDKFCRGVSLYGPFWDHILGYWKASMEKPDRVFFLKYEELKEQPSLRLKMLAEFLGCPFSPAEEANGLVDDILKLCSFDNLSNLEVNRNGKMSSGEGYNTFFRRGVVGDWMNYLTPEMVGRLDQIIEQKLHGFGL 712
            SPR+ ATHL +  LP S+ ++ +  K++ + RNPKD  VS  HF N + P+     S +E F +F +G   +G ++D  +  W   ++  D V F+ YE+LKE  +  +K +AEFLG  F   E+    +  I    +F  +     + +G +         FR+G VGDW N  +      +D+  ++ L G  L
Sbjct:  111 SPRILATHLHYDKLPGSIFENKA--KILVIFRNPKDTAVSFLHFHNDV-PDIPSYGSWDEFFRQFMKGQVSWGRYFDFAIN-WNKHLDG-DNVKFILYEDLKENLAAGIKQIAEFLGF-FLTGEQ----IQTISVQSTFQAMRAKSQDTHGAVGP-----FLFRKGEVGDWKNLFSEIQNQEMDEKFKECLAGTSL 291          
BLAST of CF833911 vs. ExPASy Swiss-Prot
Match: ST6B1_MOUSE (Sulfotransferase 6B1 OS=Mus musculus GN=Sult6b1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.528e-15
Identity = 60/196 (30.61%), Postives = 99/196 (50.51%), Query Frame = -3
Query:  125 SPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHFTNKLRPEEKGTNSLEETFDKFCRGVSLYGPFWDHILGYWKASMEKPDRVFFLKYEELKEQPSLRLKMLAEFLGCPFSPAEEANGLVDDILKLCSFDNLSNLEVNRNGKMSSGEGYNTFFRRGVVGDWMNYLTPEMVGRLDQIIEQKLHGFGL 712
            SPR+  THL +  LP S+  + +  K++ + RNPKD  VS +HF N + P+     S +E F +F +G   +G ++D  +  W   ++  + V F+ YE+LKE   + +K ++EFLG  FS  +E    ++ I    +F     L +  N + + G      FR+G VGDW           +D+  ++ L G  L
Sbjct:  111 SPRILTTHLHYDKLPQSIFKNKA--KILVIFRNPKDTAVSFFHFHNDV-PDIPSYASWDEFFRQFIKGQVSWGSYFDFAIN-WNKHIDD-ENVKFILYEDLKENLVVGIKQISEFLG--FSLTDEQ---IETISTQSTF-----LAMRANSQETHGAIGPFLFRKGEVGDWKRLFNETQNQEMDERFKECLAGTSL 291          
BLAST of CF833911 vs. ExPASy Swiss-Prot
Match: ST6B1_PANTR (Sulfotransferase 6B1 OS=Pan troglodytes GN=SULT6B1 PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.019e-15
Identity = 60/196 (30.61%), Postives = 97/196 (49.49%), Query Frame = -3
Query:  125 SPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHFTNKLRPEEKGTNSLEETFDKFCRGVSLYGPFWDHILGYWKASMEKPDRVFFLKYEELKEQPSLRLKMLAEFLGCPFSPAEEANGLVDDILKLCSFDNLSNLEVNRNGKMSSGEGYNTFFRRGVVGDWMNYLTPEMVGRLDQIIEQKLHGFGL 712
            SPR+ ATHL +  LP S+  + +  K++ + RNPKD  VS +HF N + P+     S +E F +  +G   +G ++D  +  W   ++  D V F+ YE+LKE  +  +K +AEFLG  F   E+    +  I    +F  +     + +G +         FR+G VGDW N         +D+  ++ L G  L
Sbjct:  111 SPRILATHLHYDKLPGSIFKNKA--KILVIFRNPKDTAVSFFHFHNDV-PDIPSYGSWDEFFRQLMKGQVSWGSYFDFAIN-WNKHLDG-DNVKFILYEDLKENLAAGIKQIAEFLGF-FLTGEQ----IQTISVQSTFQAMRAKSQDTHGAVGP-----FLFRKGEVGDWKNLFGEIQNQEMDEKFKECLAGTSL 291          
BLAST of CF833911 vs. ExPASy Swiss-Prot
Match: ST6B1_GORGO (Sulfotransferase 6B1 OS=Gorilla gorilla gorilla GN=SULT6B1 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.861e-15
Identity = 59/196 (30.10%), Postives = 97/196 (49.49%), Query Frame = -3
Query:  125 SPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHFTNKLRPEEKGTNSLEETFDKFCRGVSLYGPFWDHILGYWKASMEKPDRVFFLKYEELKEQPSLRLKMLAEFLGCPFSPAEEANGLVDDILKLCSFDNLSNLEVNRNGKMSSGEGYNTFFRRGVVGDWMNYLTPEMVGRLDQIIEQKLHGFGL 712
            SPR+ ATHL +  LP S+  + +  K++ + RNP D  VS +HF N + P+     S +E F +F +G   +G ++D  +  W   ++  D V F+ YE+LKE  +  +K + EFLG  F   E+    +  I    +F  +     + +G +         FR+G VGDW N  +      +D+  ++ L G  L
Sbjct:  111 SPRILATHLHYDKLPGSIFKNKA--KILVIFRNPTDTAVSFFHFHNDV-PDIPSYGSWDELFRQFMKGQVSWGSYFDFAIN-WNKHLDG-DNVKFILYEDLKENLAAGIKQIPEFLGF-FLTGEQ----IQTISVQSTFQAMRAKSQDTHGAVGP-----FLFRKGEVGDWKNLFSEIQNQEMDEKFKECLAGTSL 291          
The following BLAST results are available for this feature:
BLAST of CF833911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
ST6B1_HUMAN7.110e-1631.12Sulfotransferase 6B1 OS=Homo sapiens GN=SULT6B1 PE... [more]
ST6B1_MOUSE3.528e-1530.61Sulfotransferase 6B1 OS=Mus musculus GN=Sult6b1 PE... [more]
ST6B1_PANTR6.019e-1530.61Sulfotransferase 6B1 OS=Pan troglodytes GN=SULT6B1... [more]
ST6B1_GORGO7.861e-1530.10Sulfotransferase 6B1 OS=Gorilla gorilla gorilla GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04I05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04I05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833911 ID=CF833911; Name=CF833911; organism=Citrus sinensis; type=EST; length=858bp
TTTTTTTTTTTTTTAAGAGAAACGATGTAGATTAATCTAAACACACCAAC
TTTATTGTAAAAGACGAACAACAGCATCAACACATAAACAATGAAACATT
AACCAGTCTACGAGTCTAGAACTTTAATCCAAAGCCATGCAATTTTTGTT
CAATGATTTGGTCCAAACGTCCTACCATTTCGGGTGTCAGGTAATTCATC
CAATCTCCGACCACACCTCGCCGGAAAAAGGTGTTGTACCCTTCGCCGGA
GGACATTTTCCCGTTTCTGTTGACCTCCAAGTTGCTCAAGTTATCAAAGC
TACATAACTTCAAGATATCATCCACCAGACCATTCGCTTCTTCTGCTGGC
GAAAATGGACATCCCAAGAACTCAGCCAGCATCTTCAAACGAAGACTGGG
CTGTTCTTTCAGTTCTTCATACTTTAAGAAGAAAACCCTATCAGGTTTTT
CCATGCTTGCCTTCCAGTAGCCCAAAATATGATCCCAAAAGGGCCCATAC
AAACTCACTCCCCTGCAAAACTTATCAAAAGTTTCTTCAAGAGAATTTGT
ACCCTTTTCTTCGGGTCTCAGCTTGTTGGTAAAGTGCCAGAGCGACACAA
AAATGTCCTTAGGGTTCCTACACAAATACACAAGTTTGCAAGCTGATGAT
GAATCTTTAACAGATGCAGGCAATGAGACAAAGGGCAAGTGGGTTGCAAA
GAGCCTTGGAGAGGTCAAGGTGGTGAGGTCAGGAACCTGATTATCAACAT
ATAATTTAAGCTCAATGAAGGGTACAAGCTCATGAGGATTGTTGGTAAGC
AAAGGGTGGTTACAGGGATTATCAACATAACGCAAACGGTTGACTATGGC
AAACGTTA
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