CF833939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 219.164 bits (557), Expect = 1.526e-56 Identity = 106/183 (57.92%), Postives = 135/183 (73.77%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 L+ DPE+ +I+ E RQ I LIASENFT+ AV +ALG+ + NKYSEG PG RYYGGNE I +E LC+ RAL+ F L P +WGVNVQ SGSPAN Y A+++PH+R+MGLDLP GGHL+HGY T +KISA S YFE++PY+V+ TG IDYD LE+ A+ +RPK+++ G SAY R Sbjct: 18 LKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGGNEHIHRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPHGGHLSHGYQTD-SRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAYCR 199
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.993e-56 Identity = 105/183 (57.38%), Postives = 133/183 (72.68%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 ++ VDPE+ ++ E+ RQ + LI SENFTS AV++ LGS + NKYSEG PG RYYGGN+FID+ E+LC++RAL + LDP +WGVNVQ SG+PAN AY+AV+E DR+MGLDLP GGHL+HGY G KIS S YF ++PY VN+ TG IDYD L + FRPK+I+ G SAY R Sbjct: 27 VQEVDPEMFRILSDERSRQKHSVTLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNQFIDKAESLCQARALDLYGLDPEKWGVNVQALSGAPANLYAYSAVMEVGDRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYDTLAMTSKLFRPKVIVAGTSAYSR 209
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.189e-46 Identity = 98/185 (52.97%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 ++L DP I DLI E+RRQ I LI SEN+ S AV+EA G+ LTNKYSEG P RYY G +FID+IE + RA Q F +D NVQPYSGSPAN A Y A+L P D +MG+ LP GGHLTHG+ +SAT I+F S+ Y V TG ID+D++ E A RPK+I GG+A PR Sbjct: 9 AALTATDPTIADLIRAEERRQSEKIRLIPSENYVSKAVLEATGTVLTNKYSEGYPNRRYYEGQQFIDQIETIAIERAKQLFGVD----HANVQPYSGSPANLAIYLALLSPGDTVMGMALPMGGHLTHGW------PVSATGIWFRSVQYGVRRDTGRIDFDEVREVARRERPKVIFAGGTAIPR 183
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_SALRD (Serine hydroxymethyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=glyA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.166e-46 Identity = 95/186 (51.08%), Postives = 127/186 (68.28%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRD 653 S+L DPEIHD+I+KE +RQ G+ELIASENF S AV+EA+G+ALTNKY+EG+PG RYYGG E +D E L R RA + + D W VNVQP++G+ AN A Y +L+P D +GLDL GGHLTH G ++ + I +E+ Y V TG ID +++ ++A + +PK+I G SAYPRD Sbjct: 2 SALRNQDPEIHDVIQKEVQRQNDGLELIASENFASRAVMEAMGTALTNKYAEGLPGKRYYGGCEVVDRAEELARERAKELYDCD---W-VNVQPHAGAQANSAVYLTLLDPGDTFLGLDLSHGGHLTH------GSPVNFSGILYEAEYYGVEEETGRIDMNRVRDRAKEVQPKMISIGASAYPRD 177
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPB (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=glyA PE=3 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.212e-45 Identity = 102/181 (56.35%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY 644 L+ D I D I E RRQ +ELIASENF S AV+EA GS +TNKY+EG PG RYYGG EF+D ENL R RA + F D VNVQP+SGS AN AVL+P DRIMGLDL GGHLTH G K++ + FE+ Y V+ TG ID +K+EE AL+ RPKLIICG SAY Sbjct: 6 LQRQDKGIFDAITAEVRRQTETLELIASENFASRAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMGVLFAVLKPGDRIMGLDLSHGGHLTH------GSKVNFSGQLFEAHSYGVDRETGCIDMNKVEEMALEVRPKLIICGASAY 176
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_THEAB (Serine hydroxymethyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glyA PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.067e-45 Identity = 98/188 (52.13%), Postives = 123/188 (65.43%), Query Frame = 3 Query: 87 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 W N ++ DPEI+D+I KE RQ G+ELIASENF S AVIEA+GS LTNKY+EG PG RYYGG E++D E L R RA + F++ NVQP+SGS AN AY AV EP D IMG+ L GGHLTH G ++ + + +PY VN T IDYD++ + AL +PK+I+ GGSAY R Sbjct: 2 WEN--VKKTDPEIYDVILKEWERQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVK----YANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTH------GASVNFSGRIYNVVPYGVNPETEVIDYDEVRDLALKHKPKIIVAGGSAYSR 177
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_SYNY3 (Serine hydroxymethyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glyA PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.700e-45 Identity = 95/191 (49.74%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 78 VNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 +N+ L T DP + +I++E +RQ IELIASENFTS AV+ A GS LTNKY+EG+PG RYYGG EF+D+ E L SR + F NVQP+SG+ ANFA + +L+P D IMG+DL GGHLTH G ++ + +FE Y V TG +DYDK+ ++AL+ +PKL+ICG SAYPR Sbjct: 1 MNQTNLDFLATSDPALAAIIDRELQRQRTHIELIASENFTSAAVMAAQGSVLTNKYAEGLPGKRYYGGCEFVDQAETLAISRVKELFGAA----HANVQPHSGAQANFAVFLTLLQPGDTIMGMDLSHGGHLTH------GSPVNVSGKWFEVAHYGVEKETGRLDYDKIRQQALEVKPKLLICGYSAYPR 181
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_SORC5 (Serine hydroxymethyltransferase OS=Sorangium cellulosum (strain So ce56) GN=glyA PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.700e-45 Identity = 98/187 (52.41%), Postives = 121/187 (64.71%), Query Frame = 3 Query: 90 GNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 G +L VDPEI +LI E+RR+ + LIASEN+ S AV+EA GS LTNKYSEG P RYY G + +D +E L R+R + F D VNVQPYSGSPAN A Y A + +D IMGL LP+GGHLTHG+ +S T YF+S+PY V S ID D++ + A RPKLI CG +AYPR Sbjct: 9 GLRALNEVDPEIAELIRLEERREADTLRLIASENYVSRAVLEATGSVLTNKYSEGYPHKRYYEGQQQVDVVEELARTRVAKLFGAD----HVNVQPYSGSPANLAVYLAFAQANDTIMGLGLPAGGHLTHGW------SVSITGKYFKSVPYGVRESDHRIDLDQVRDLARAHRPKLIWCGTTAYPR 185
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.700e-45 Identity = 95/186 (51.08%), Postives = 124/186 (66.67%), Query Frame = 3 Query: 93 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 + SL DP+I + I E+RRQ G+ELIASENF S AV++A GS TNKY+EG PG RYYGG E+ D +ENL R RA + F + NVQP+SGS AN AY A+L+P D I+GL+L GGHLTHG+ ++ + ++ +PY V T IDYD+LE+ AL+ PK+I+ GGSAYPR Sbjct: 6 SQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAE----HANVQPHSGSSANMEAYGAILQPGDTILGLNLAHGGHLTHGH------PLNFSGKTYKIVPYGVTKETETIDYDELEKLALEHHPKVIVGGGSAYPR 181
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_PROM4 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9211) GN=glyA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.526e-45 Identity = 96/187 (51.34%), Postives = 128/187 (68.45%), Query Frame = 3 Query: 93 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRD 653 NS+LE DP I LI++E +RQ +ELIASENFTS AV+EA GS LTNKY+EG+P RYYGG E ID+IE L RA Q F +W NVQP+SG+ ANF+ + ++LEP ++IMG+DL GGHLTH G ++ + +F+++ Y V+ T ++ + + E AL RPKLIICG SAYPR+ Sbjct: 5 NSALEDADPNIASLIQEESKRQENHLELIASENFTSKAVMEAQGSVLTNKYAEGLPNKRYYGGCEHIDKIEGLAIERAKQLF---KAEW-ANVQPHSGAQANFSVFLSLLEPGEKIMGMDLSHGGHLTH------GSPVNVSGKWFKAIHYGVDKETQRLEMENVREIALKNRPKLIICGYSAYPRN 181 The following BLAST results are available for this feature:
BLAST of CF833939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833939 ID=CF833939; Name=CF833939; organism=Citrus sinensis; type=EST; length=654bpback to top |