CF833939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.526e-45 Identity = 98/181 (54.14%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY 644 L+ +DPE+ + I E RRQ +ELIASENFTS AV+EA GS +TNKY+EG PG RYYGG EF+D ENL R RA + F + VNVQP+SGS AN A AVL+P D IMGLDL GGHLTH G K++ + +F++ Y V+ TG ID + +EE AL +PKLII G SAY Sbjct: 6 LKRLDPEVFEAIANETRRQTETLELIASENFTSTAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDSIMGLDLSHGGHLTH------GSKVNFSGQFFDAHSYGVDKETGIIDMNAVEEMALKVKPKLIITGASAY 176
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.606e-45 Identity = 98/184 (53.26%), Postives = 122/184 (66.30%), Query Frame = 3 Query: 93 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY 644 N L+ +DPE+ + I E +RQ +ELIASENFTS AV+EA GS +TNKY+EG PG RYYGG EF+D ENL R RA + F + VNVQP+SGS AN A AVL+P D IMGLDL GGHLTH G K++ + +F++ Y V+ TG ID +K+EE A +PKLII G SAY Sbjct: 3 NDILKRLDPEVFEAIANETKRQTETLELIASENFTSKAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDAIMGLDLSHGGHLTH------GSKVNFSGQFFDAHSYGVDKETGIIDMNKVEEMARRVKPKLIITGASAY 176
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_DESPS (Serine hydroxymethyltransferase OS=Desulfotalea psychrophila GN=glyA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.015e-45 Identity = 95/185 (51.35%), Postives = 124/185 (67.03%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 ++L+ DPEI LI++E+ RQ I LIASEN+ S AV+EA GS LTNKYSEG PG RYY G + ID+IE++ RA F + VNVQPYSGSPAN A Y A L+P D I+G+ LP GGHLTH G K+S + YF ++ Y +N G +DY+++ KAL+ +PK++I G SAYPR Sbjct: 11 TALQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYPGKRYYEGQQLIDQIESIAIDRAKAVFGAE----HVNVQPYSGSPANMAVYLAFLKPGDTILGMALPHGGHLTH------GSKVSISGKYFNAVSYALNEE-GILDYEEIRNKALECKPKILIAGHSAYPR 184
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_PELPB (Serine hydroxymethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.856e-45 Identity = 99/181 (54.70%), Postives = 120/181 (66.30%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY 644 L+ D E+ + I KE RQ +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D ENL R RA + F D VNVQP+SGS AN A +VL+P DRIMGLDL GGHLTH G ++ + +E+ Y V+ TG ID +K+EE AL RPKLIICG SAY Sbjct: 6 LQKQDSELFEAIAKETGRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTH------GSSVNFSGQMYEAHSYGVDRETGCIDMNKVEELALQVRPKLIICGASAY 176
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.856e-45 Identity = 97/183 (53.01%), Postives = 120/183 (65.57%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 L DP I DLIE+E +RQ +G+ELIASEN+TS AV+EA GS LTNKY+EG+PG RYYGG EF+D IE L RA Q F NVQP+SG+ AN A +TA+L+P D I+G+ L GGHLTH G ++ + ++ Y V++ TG IDYD L KA RPKLI G SAYPR Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTH------GSPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKLITSGASAYPR 177
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.026e-44 Identity = 97/186 (52.15%), Postives = 121/186 (65.05%), Query Frame = 3 Query: 93 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 N L DPE+ IE E +RQ R IELIASENF S AV+EA GS LTNKY+EG PG RYYGG EF+D E+L SRA + F D NVQP+SG+ ANFA Y A+L+P D+I+G++L GGHLTH G ++ + YF + Y V TG I+Y+KL E AL +PK+I+ G SAY R Sbjct: 3 NGKLAQTDPELAKAIELEHQRQQRNIELIASENFVSPAVLEAQGSILTNKYAEGYPGKRYYGGCEFVDIAESLAISRAKKLFGAD----HANVQPHSGAQANFAVYFALLQPGDKILGMNLAHGGHLTH------GSPVNVSGKYFNVVAYGVEEDTGCINYEKLREIALQEKPKMIVAGASAYAR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBL (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=glyA PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.340e-44 Identity = 93/185 (50.27%), Postives = 126/185 (68.11%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 ++L+ DPE+ D+I+KE+ RQ IELIASENFTS +V+EA+GS LTNKY+EG P RYYGG EF+DE+E+L R R + F + NVQP+SGS AN A Y +VL+ D I+G+DL GGHLTH G ++ + + + Y V+ T IDYD+L++ AL+ RPK+I+ G SAYPR Sbjct: 4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBJ (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=glyA PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.340e-44 Identity = 93/185 (50.27%), Postives = 126/185 (68.11%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 ++L+ DPE+ D+I+KE+ RQ IELIASENFTS +V+EA+GS LTNKY+EG P RYYGG EF+DE+E+L R R + F + NVQP+SGS AN A Y +VL+ D I+G+DL GGHLTH G ++ + + + Y V+ T IDY+KL++ AL+ RPK+I+ G SAYPR Sbjct: 4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYEKLKKIALENRPKMIVSGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBK (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=glyA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.750e-44 Identity = 93/185 (50.27%), Postives = 126/185 (68.11%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 ++L+ DPE+ D+I+KE+ RQ IELIASENFTS +V+EA+GS LTNKY+EG P RYYGG EF+DE+E+L R R + F + NVQP+SGS AN A Y +VL+ D I+G+DL GGHLTH G ++ + + + Y V+ T IDYD+L++ AL+ RPK+I+ G SAYPR Sbjct: 4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFVAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.750e-44 Identity = 97/183 (53.01%), Postives = 119/183 (65.03%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 L DP I DLIE+E +RQ +G+ELIASEN+TS AV+EA GS LTNKY+EG+PG RYYGG EF+D IE L RA Q F NVQP+SG+ AN A +TA+L+P D I+G+ L GGHLTH G ++ + ++ Y V+ TG IDYD L KA RPKLI G SAYPR Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIDRACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTH------GSPVNFSGKWYNVHFYGVDPQTGQIDYDDLAAKARAIRPKLITSGASAYPR 177 The following BLAST results are available for this feature:
BLAST of CF833939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833939 ID=CF833939; Name=CF833939; organism=Citrus sinensis; type=EST; length=654bpback to top |