CF833939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB6 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=glyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.899e-44 Identity = 92/185 (49.73%), Postives = 126/185 (68.11%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 ++L+ DPE+ D+I+KE+ RQ IELIASENFTS +V+EA+GS LTNKY+EG P RYYGG EF+DE+E+L R R + F + NVQP+SGS AN A Y +VL+ D I+G+DL GGHLTH G ++ + + + Y V+ T IDY++L++ AL+ RPK+I+ G SAYPR Sbjct: 4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYEQLKKIALENRPKMIVSGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_SOLUE (Serine hydroxymethyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=glyA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.092e-44 Identity = 96/184 (52.17%), Postives = 121/184 (65.76%), Query Frame = 3 Query: 99 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 +L VDPEI+ I+ E RQ +ELIASENFTS AV+EA GS TNKY+EG PG RYYGG E+ D +ENL R RA + F + VNVQP+SGS AN AAY AV+ P D +MGL+L GGHLTHG+ + K ++ +PY V IDYD++E+ A + +PK+II G SAYPR Sbjct: 10 TLAEVDPEIYQAIQHETARQDGQLELIASENFTSEAVLEATGSVFTNKYAEGYPGKRYYGGCEYTDVVENLARERASKLFGAE----YVNVQPHSGSQANQAAYGAVVSPGDTVMGLNLAHGGHLTHGHALNFSGKT------YKIVPYNVRKEDELIDYDEVEKLAREHQPKMIIAGASAYPR 183
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.092e-44 Identity = 93/183 (50.82%), Postives = 125/183 (68.31%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 L+ DP ++++ EKE +RQ +E+IASENFTS AV+EA+GS TNKY+EG PG RYYGG E+ D IE L RA + F + VNVQP+SGS AN Y A+L+P+D+I+G+DL GGHLTH G K++A+ ++S Y VN G+IDYD++ + A +PKLI+CG SAYPR Sbjct: 4 LKNQDPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYADAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHLTH------GAKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVCGASAYPR 175
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.092e-44 Identity = 93/191 (48.69%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 78 VNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 ++EW + L VDPE+ +++EK+RQ IELIASENF S AV+EA GS LTNKY+EG PG RYYGG EF+D++E L RA + F + NVQP+SG+ AN Y A LEP D ++G++L GGHLTH G ++ + YF + Y V++ TG IDYD++ A + +PKLI+ G SAYPR Sbjct: 1 MSEWKH--LHQVDPEVAAAMDREKKRQKNNIELIASENFVSEAVMEAAGSVLTNKYAEGYPGKRYYGGCEFVDQVERLAIERAKRLFGAE----HANVQPHSGANANMGVYFACLEPGDTVLGMNLAHGGHLTH------GSPVNISGKYFRFVAYGVDAHTGRIDYDEVARIARETKPKLIVAGASAYPR 179
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK5 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glyA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.092e-44 Identity = 92/185 (49.73%), Postives = 124/185 (67.03%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 + L+ D +I+ +IE+E RQ GIELIASENFTS +V+EA+GS LTNKY+EG PG RYYGG +D+ E+L R R + F+ + VNVQP+SGS AN A Y +VL+P D ++G+ L GGHLTH G K+S + + + Y +NS T IDYD++ E AL +PK+I+ G SAYPR Sbjct: 4 NELKNTDKDIYGIIEEEWERQKNGIELIASENFTSKSVMEAMGSFLTNKYAEGYPGKRYYGGCYIVDKAEDLARDRMKKLFNAE----HVNVQPHSGSQANMAVYMSVLKPGDTVLGMSLNHGGHLTH------GSKVSFSGKLYNFVSYGLNSDTEIIDYDEMRELALKHKPKMIVSGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK1 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=glyA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.092e-44 Identity = 92/185 (49.73%), Postives = 124/185 (67.03%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 + L+ D +I+ +IE+E RQ GIELIASENFTS +V+EA+GS LTNKY+EG PG RYYGG +D+ E+L R R + F+ + VNVQP+SGS AN A Y +VL+P D ++G+ L GGHLTH G K+S + + + Y +NS T IDYD++ E AL +PK+I+ G SAYPR Sbjct: 4 NELKNTDKDIYGIIEEEWERQKNGIELIASENFTSKSVMEAMGSFLTNKYAEGYPGKRYYGGCYIVDKAEDLARDRMKKLFNAE----HVNVQPHSGSQANMAVYMSVLKPGDTVLGMSLNHGGHLTH------GSKVSFSGKLYNFVSYGLNSDTEIIDYDEMRELALKHKPKMIVSGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_THETN (Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis GN=glyA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.651e-44 Identity = 92/183 (50.27%), Postives = 120/183 (65.57%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 + DPEI ++I KE RQ IELIASENF S AV+EA+G+ LTNKY+EG PG RYYGG E++D E L R R + F + NVQP+SG+ AN AAY A+L+P D ++G+DL GGHLTH G K++ + + + Y V TGYIDYD++E+ A +PKLI+ G SAYPR Sbjct: 6 IRKTDPEIAEVILKELNRQRNKIELIASENFVSRAVMEAMGTPLTNKYAEGYPGRRYYGGCEYVDMAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALLKPGDTVLGMDLAHGGHLTH------GSKVNFSGQIYNFVSYGVREDTGYIDYDQVEDLAKKHKPKLIVAGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_CARHZ (Serine hydroxymethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=glyA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.651e-44 Identity = 94/186 (50.54%), Postives = 123/186 (66.13%), Query Frame = 3 Query: 93 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 N L+ VDPEI + +EKE RQ IELIASENF S AV+EA+GS LTNKY+EG+PG RYYGG E++D +ENL R RA + F + VNVQP+SG+ AN AAY A LEP D ++G++L GGHLTH G ++ + + + Y V T I+Y+K+ E A +PK+I+ G SAYPR Sbjct: 5 NLRLKDVDPEIFEAMEKELSRQREKIELIASENFVSRAVMEAMGSHLTNKYAEGLPGKRYYGGCEYVDVVENLARERAKKLFGAE----HVNVQPHSGAQANMAAYMAFLEPGDTVLGMNLAHGGHLTH------GSPVNFSGKLYNFVSYGVEPDTEKINYEKVFELAYKHKPKMIVAGASAYPR 180
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA2_RHILO (Serine hydroxymethyltransferase 2 OS=Rhizobium loti GN=glyA2 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.651e-44 Identity = 91/188 (48.40%), Postives = 122/188 (64.89%), Query Frame = 3 Query: 87 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 +G SSL VD +H+L+ +++R++ ++LIASENF S AV+EA GS NKY+EG PG RYY GNE +DE+E L R F + NVQPYSGSPAN A Y A+L P D++MGL LP GGHLTHG+ ++ + ++ +PY ++ T IDYD+L E A RPKLI GG++YPR Sbjct: 7 YGRSSLVQVDCRVHELLLRQRRQERTMLKLIASENFASSAVLEATGSIFANKYAEGYPGARYYAGNEIVDELETLAIERLKALFGSE----HANVQPYSGSPANQAVYRALLSPRDKVMGLPLPEGGHLTHGW------SVNFSGTDYQRVPYGLHDKTQQIDYDRLRETARRERPKLIWVGGTSYPR 184
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_THEPX (Serine hydroxymethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=glyA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 8.686e-44 Identity = 93/183 (50.82%), Postives = 118/183 (64.48%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 + DPEI D IEKE RQ IELIASENF S AV+EA+GS LTNKY+EG P RYYGG E++D E L R R + F + NVQP+SG+ AN AAY A+++P D ++G+DL GGHLTH G K++ + + + Y V TGYIDYD++E A +PKLI+ G SAYPR Sbjct: 6 IRKTDPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYVDIAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHLTH------GSKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPR 178 The following BLAST results are available for this feature:
BLAST of CF833939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833939 ID=CF833939; Name=CF833939; organism=Citrus sinensis; type=EST; length=654bpback to top |