CF833939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_THEP3 (Serine hydroxymethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=glyA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 8.686e-44 Identity = 93/183 (50.82%), Postives = 118/183 (64.48%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 + DPEI D IEKE RQ IELIASENF S AV+EA+GS LTNKY+EG P RYYGG E++D E L R R + F + NVQP+SG+ AN AAY A+++P D ++G+DL GGHLTH G K++ + + + Y V TGYIDYD++E A +PKLI+ G SAYPR Sbjct: 6 IRKTDPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYVDIAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHLTH------GSKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_THEM4 (Serine hydroxymethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glyA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.134e-43 Identity = 97/188 (51.60%), Postives = 124/188 (65.96%), Query Frame = 3 Query: 87 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 W N ++ VDPEI+++I KE RQ G+ELIASENF S AVIEA+GS LTNKY+EG PG RYYGG E++D E L R RA + F++ NVQP+SGS AN AY AV EP D IMG+ L GGHLTH G ++ + + + Y V+S T I+YD++ E AL +PK+II GGSAY + Sbjct: 2 WEN--VKKVDPEIYEVILKEWDRQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVK----YANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTH------GAPVNFSGRIYNVVSYGVDSETEVINYDEVRELALKHKPKIIIAGGSAYSK 177
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_METHJ (Serine hydroxymethyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=glyA PE=3 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.482e-43 Identity = 93/186 (50.00%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 96 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRD 653 S LET DPEI +I+KE RQ G+ELIASEN S AV+EA GS +TNKY+EG PG RYYGG EF D ENL R R F + NVQP+SGS AN A Y VL+P D+I+ ++L GGHL+H G ++ + I +ES Y V+ T +DY + E A +PK+I+CG SAYPR+ Sbjct: 2 SYLETTDPEIAAIIDKETNRQINGLELIASENVVSRAVLEASGSIMTNKYAEGYPGKRYYGGCEFHDMAENLARDRVCSLFGAE----HANVQPHSGSQANMAVYFTVLKPSDKILSMNLSQGGHLSH------GSPVNFSGIIYESHQYGVDLKTERMDYGTIAEMARTIKPKIIVCGASAYPRE 177
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_THEYD (Serine hydroxymethyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glyA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.935e-43 Identity = 92/184 (50.00%), Postives = 123/184 (66.85%), Query Frame = 3 Query: 99 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 SL VD EI+ LI +EK+R+ I +IASEN+ S AV+EA GS TNKY+EG PG RYYGG E+ DE+E L + RA Q F+++ VNVQP+SG+ AN A Y A+L+P D IMG+ L GGHL+H G ++ T ++++ Y VN TGYID D++ A + +PK+II G SAYPR Sbjct: 5 SLREVDAEIYSLILQEKKRETNKILMIASENYASRAVMEAQGSLFTNKYAEGYPGRRYYGGCEYADEVERLAQERAKQLFNVE----HVNVQPHSGTQANMAVYFAMLQPGDTIMGMSLTHGGHLSH------GSPVNFTGKLYKTVFYGVNKETGYIDMDEVRRLAQEHKPKIIITGASAYPR 178
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_SYNJA (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) GN=glyA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.935e-43 Identity = 95/183 (51.91%), Postives = 120/183 (65.57%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 L DP ++ LI++E RQ +E+IASENFTS AV+ A GS LTNKY+EG+PG RYYGG EFIDEIE L RA Q F NVQP+SG+ ANFA + A+L+P D IMG+DL GGHLTH G ++ + +F + Y V+ T ID+D++ + A RPKLIICG SAYPR Sbjct: 11 LAETDPVVYRLIQQELNRQRDHLEMIASENFTSPAVLAAQGSVLTNKYAEGLPGKRYYGGCEFIDEIEQLAIDRAKQLFGAA----HANVQPHSGAQANFAVFLALLQPGDTIMGMDLAHGGHLTH------GSPVNVSGKWFRVVHYGVDPQTERIDFDQVRDLARQHRPKLIICGYSAYPR 183
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_PROM9 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9312) GN=glyA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.527e-43 Identity = 92/184 (50.00%), Postives = 123/184 (66.85%), Query Frame = 3 Query: 99 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 +L+ DP I + I EK RQ +ELIASENF S AV++A GS LTNKY+EG+P RYYGG EF+DEIE L RA + F+ W NVQP+SG+ AN A + ++L+P D IMG+DL GGHLTH G ++ + +F ++ Y VN T +++D++ E AL+ +PKLIICG SAYPR Sbjct: 6 NLKKSDPVISNFINSEKNRQETHLELIASENFASIAVMQAQGSVLTNKYAEGLPQKRYYGGCEFVDEIEELAIQRAKKLFN---ANW-ANVQPHSGAQANAAVFLSLLQPGDTIMGMDLSHGGHLTH------GSPVNMSGKWFNAVHYGVNKETSELNFDEIREIALETKPKLIICGYSAYPR 179
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_PROM2 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9215) GN=glyA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.527e-43 Identity = 92/184 (50.00%), Postives = 124/184 (67.39%), Query Frame = 3 Query: 99 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 +L+ DP I + I EK RQ +ELIASENF S AV++A GS LTNKY+EG+P RYYGG EF+DEIE L +RA + F+ W NVQP+SG+ AN A + ++L+P D IMG+DL GGHLTH G ++ + +F ++ Y VN T +++D++ E AL+ +PKLIICG SAYPR Sbjct: 6 NLKDSDPVISNFINSEKNRQETHLELIASENFASIAVMQAQGSVLTNKYAEGLPQKRYYGGCEFVDEIEELAINRAKKLFN---ANW-ANVQPHSGAQANAAVFLSLLKPGDTIMGMDLSHGGHLTH------GSPVNMSGKWFNAVHYGVNKETSELNFDEIREIALETKPKLIICGYSAYPR 179
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_PROM0 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9301) GN=glyA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.527e-43 Identity = 92/184 (50.00%), Postives = 124/184 (67.39%), Query Frame = 3 Query: 99 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 +L+ DP I + I+ EK RQ +ELIASENF S AV+EA GS LTNKY+EG+P RYYGG EF+D+IE L RA + F+ W NVQP+SG+ AN A + ++L+P D IMG+DL GGHLTH G ++ + +F ++ Y VN T +++D++ E AL+ +PKLIICG SAYPR Sbjct: 6 NLKESDPVISNFIKSEKNRQETHLELIASENFASIAVMEAQGSVLTNKYAEGLPQKRYYGGCEFVDQIEELAIQRAKKLFN---ANW-ANVQPHSGAQANAAVFLSLLKPGDTIMGMDLSHGGHLTH------GSPVNMSGKWFNAVHYGVNKETSELNFDEIREIALETKPKLIICGYSAYPR 179
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_MYCA5 (Serine hydroxymethyltransferase OS=Mycoplasma arthritidis (strain 158L3-1) GN=glyA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.527e-43 Identity = 95/184 (51.63%), Postives = 121/184 (65.76%), Query Frame = 3 Query: 93 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY 644 N + D +I DLI KE RQ IELIASEN+ S V++A GS+LTNKY EG PG RYYGG EF+DEIE + + RA + F+ NVQPYSGS AN A Y A+L P D ++GL L SGGHLTHGY +IS + I+++S Y VN G +DYD++ + A + +PK+IICG SAY Sbjct: 2 NKKVTLHDQDIADLINKESHRQEEHIELIASENYVSEDVMKAAGSSLTNKYGEGYPGKRYYGGCEFVDEIEKIAQERACKLFNAK----YANVQPYSGSVANAAIYMALLNPGDSVLGLSLDSGGHLTHGY------RISFSGIFYKSYTYTVNQD-GVLDYDEILKIAQEVKPKMIICGYSAY 174
BLAST of CF833939 vs. ExPASy Swiss-Prot
Match: GLYA_ANAVT (Serine hydroxymethyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glyA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.527e-43 Identity = 95/183 (51.91%), Postives = 119/183 (65.03%), Query Frame = 3 Query: 102 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR 650 L DP I LI +E +RQ +ELIASENFTS AV+ A GS LTNKY+EG+PG RYYGG EFID+IE + RA Q F NVQP+SG+ ANFA + +L P D+IMG+DL GGHLTH G ++ + +F+ Y V+ T +DYD++ E AL RPKL+ICG SAYPR Sbjct: 9 LTNSDPAIAGLINQELQRQRDHLELIASENFTSAAVLAAQGSVLTNKYAEGLPGKRYYGGCEFIDKIEQIAIDRAKQLFGAA----HANVQPHSGAQANFAVFLTLLAPGDKIMGMDLSHGGHLTH------GSPVNVSGKWFQVCHYGVSQQTEQLDYDQIRELALRERPKLLICGYSAYPR 181 The following BLAST results are available for this feature:
BLAST of CF833939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833939 ID=CF833939; Name=CF833939; organism=Citrus sinensis; type=EST; length=654bpback to top |