CF833984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_STRPN (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27 Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVP-SKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVG-----RNIIHGSDGPETAKDEIKLWF 632 ME+TF IKPDGV+RGL+ E++ R E++GF + ++ S+E +HY DL + F+ + EF++SGPV+ V G VI R ++GAT P+++ PGTIRGD A G +N++HGSD E+AK EI LWF Sbjct: 1 MEQTFFIIKPDGVKRGLVGEVLKRIEQRGFTIEKLEFRSQVSEELIDQHYQDLVGQSFYPPIREFMTSGPVLVGVISGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_STRPI (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27 Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVP-SKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVG-----RNIIHGSDGPETAKDEIKLWF 632 ME+TF IKPDGV+RGL+ E++ R E++GF + ++ S+E +HY DL + F+ + EF++SGPV+ V G VI R ++GAT P+++ PGTIRGD A G +N++HGSD E+AK EI LWF Sbjct: 1 MEQTFFIIKPDGVKRGLVGEVLKRIEQRGFTIEKLEFRSQVSEELIDQHYQDLVGQSFYPPIREFMTSGPVLVGVISGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_STRP2 (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27 Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVP-SKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVG-----RNIIHGSDGPETAKDEIKLWF 632 ME+TF IKPDGV+RGL+ E++ R E++GF + ++ S+E +HY DL + F+ + EF++SGPV+ V G VI R ++GAT P+++ PGTIRGD A G +N++HGSD E+AK EI LWF Sbjct: 1 MEQTFFIIKPDGVKRGLVGEVLKRIEQRGFTIEKLEFRSQVSEELIDQHYQDLVGQSFYPPIREFMTSGPVLVGVISGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_PHOPR (Nucleoside diphosphate kinase OS=Photobacterium profundum GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27 Identity = 63/136 (46.32%), Postives = 87/136 (63.97%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +E+TF IKPD V+R LI I RFE G K+VA K+V AQ Y + +E+PFFN L EF++SGPV+ V EGE I R+L+G T+P+ + GTIR D A+ + N +HGSD PE+A EI +F +++ Sbjct: 3 IEKTFSIIKPDAVKRNLIGAIYQRFENAGLKIVASKMVHLDATKAQGFYAEHEEKPFFNELVEFMTSGPVMVQVLEGEDAIHRYRELMGTTNPENAACGTIRSDFALSMRYNSVHGSDSPESAAREIAYFFTEDEI 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_DELAS (Nucleoside diphosphate kinase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27 Identity = 62/131 (47.33%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 632 +ERT IKPD V + +I +I +RFE G K++A K+V S+ A++ Y KERPFF L +F+ SGPV+ EGE I R+L+GATDP+K+E GTIR D A + N +HGSD ETA E+ +F Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYARFEGAGLKVIAAKMVHLSRGEAEQFYGVHKERPFFKDLVDFMVSGPVMIQALEGENAILKNRELMGATDPKKAEKGTIRADFADSIDANAVHGSDAAETAAVEVAFFF 133
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_ACISJ (Nucleoside diphosphate kinase OS=Acidovorax sp. (strain JS42) GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 632 +ERT IKPD V + +I +I +RFE G K+ A +++ S+ A++ Y KERPFF L +F+ SGPV+ EGE + R+L+GATDP+K+ PGTIR D A + N +HGSD ETA+ E+ +F Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYARFEAAGLKIAAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVAFFF 133
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_STRGG (Nucleoside diphosphate kinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ndk PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.564e-27 Identity = 60/131 (45.80%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 240 ERTFIAIKPDGVQRGLISEIISRFERKG-FKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 629 +RT + +KPD V+RGLI EI+ R ERK +++ A+++ ++HY + K RPF+ L EF+ SGPV+A+V EGE VI R L G TDP + PG+IRGD + N+IH SD E+A+ E+KL+F Sbjct: 3 QRTLVLLKPDAVRRGLIGEIVGRIERKADWRITALELRTLDHGTLEQHYGEHKGRPFYEPLMEFMQSGPVVALVAEGERVIEGVRTLAGPTDPIAAAPGSIRGDFGTITRENLIHASDSEESAERELKLFF 133
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_LARHH (Nucleoside diphosphate kinase OS=Laribacter hongkongensis (strain HLHK9) GN=ndk PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.564e-27 Identity = 62/136 (45.59%), Postives = 84/136 (61.76%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERT +KPD V + +I +I RFE G K+VA K+ S+ A+ Y KERPFFN L EF+ SGPV+ V EGE + R+L+GATDP+K++ GTIR D A + N +HGSD E A EI +F ++ Sbjct: 3 IERTLSIVKPDAVAKNVIGKIYDRFESNGLKIVAAKMKHLSRREAEGFYAVHKERPFFNDLVEFMISGPVMVQVLEGENAVLKNRELMGATDPKKADAGTIRADFAESIDANAVHGSDSLENAAIEIAYFFSATEV 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_COLP3 (Nucleoside diphosphate kinase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=ndk PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.564e-27 Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF +KPD V + I +I +RFE G K+VA K++ S+E A+ Y + ERPFF L EF++SGPV+ V EGE + R+++GAT+P ++ GTIR DLA + N HGSD E+A EI +F +++ Sbjct: 3 IERTFSIVKPDAVAKNFIGQIYNRFETAGLKIVASKMIHLSQEKAEGFYAEHSERPFFGALVEFMTSGPVMVQVLEGENAVLKNREIMGATNPAEALAGTIRADLADSIDENAAHGSDALESAAREIAYFFSDDEI 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_BURVG (Nucleoside diphosphate kinase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=ndk PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.564e-27 Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 632 +ERT IKPD V + +I +I SRFE G K+VA ++ S+ A+K Y RPFF L +F+ SGPV+ V EGEG I R L+GATDP+K+E GTIR D A + N +HGSD ETA EI +F Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRADAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAAETAAVEIAFFF 133 The following BLAST results are available for this feature:
BLAST of CF833984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833984 ID=CF833984; Name=CF833984; organism=Citrus sinensis; type=EST; length=832bpback to top |