CF833984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_LEGPC (Nucleoside diphosphate kinase OS=Legionella pneumophila (strain Corby) GN=ndk PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.492e-26 Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 219 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVN 629 E T IKPD V + +I EI +RFE+ G +VA K+ S+E A+ Y + RPFF L +F+ SGPV+ V +GE + R+++GAT+P+++ PGTIR D A + N +HGSD E A EI +F+P +L N Sbjct: 4 ELTLSIIKPDAVAKSVIGEIYTRFEKAGLDIVAAKMTQLSREQAENFYDIHRARPFFKDLVDFMISGPVMIQVLKGENAVAKNREIMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAAREIAFFFEPHELCN 140
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_LEGPA (Nucleoside diphosphate kinase OS=Legionella pneumophila (strain Paris) GN=ndk PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.492e-26 Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = -3 Query: 219 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVN 629 E T IKPD V + +I EI +RFE+ G +VA K++ S+E A+ Y + RPFF L +F+ SGPV+ V +G+ + R+++GAT+P+++ PGTIR D A + N +HGSD E A EI +F+P +L N Sbjct: 4 ELTLSIIKPDAVAKSVIGEIYTRFEKAGLDIVAAKMIQLSREQAESFYDIHRARPFFKDLVDFMISGPVMIQVLKGDNAVAKNREIMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAAREIAFFFEPHELCN 140
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_RHIEC (Nucleoside diphosphate kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ndk PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.254e-26 Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = -3 Query: 222 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 632 +ERTF IKPD +R L I E G ++VA K V S+ A+ Y K+RPFF L E ++SGP + V EGEG I R+++GAT+P + GTIR A+ +G N +HGSD PETA EIK WF ++V Sbjct: 3 IERTFSMIKPDATKRNLTGAITKMLEDAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEGMTSGPTVVQVLEGEGAILKNREIMGATNPANAAEGTIRKVHALSIGENSVHGSDAPETAAQEIKYWFSDTEIV 139
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_CLOPE (Nucleoside diphosphate kinase OS=Clostridium perfringens GN=ndk PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.254e-26 Identity = 56/131 (42.75%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 632 +E++ + IKPD V+R LI +I+ +E G K+ A+++ +KEFA+KHY + +++ FFN L ++++ P++A++ EGE I R L GAT+P+K+E GTIR A+ N +H SD E+A+ EIKLWF Sbjct: 3 LEKSLVLIKPDAVERNLIGKILEVYEGAGLKIKAMEMKQINKEFAEKHYEEHRDKQFFNSLIKYITRSPLVALILEGEDAINKIRSLNGATNPEKAEFGTIRRRFALSGTENSVHASDSIESAEKEIKLWF 133
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_CLOP1 (Nucleoside diphosphate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=ndk PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.254e-26 Identity = 56/131 (42.75%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 632 +E++ + IKPD V+R LI +I+ +E G K+ A+++ +KEFA+KHY + +++ FFN L ++++ P++A++ EGE I R L GAT+P+K+E GTIR A+ N +H SD E+A+ EIKLWF Sbjct: 3 LEKSLVLIKPDAVERNLIGKILEVYEGAGLKIKAMEMKQINKEFAEKHYEEHRDKQFFNSLIKYITRSPLVALILEGEDAINKIRSLNGATNPEKAEFGTIRRRFALSGTENSVHASDSIESAEKEIKLWF 133
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_STRMK (Nucleoside diphosphate kinase OS=Stenotrophomonas maltophilia (strain K279a) GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = -3 Query: 219 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVN 632 +ERT IKPD V + +I EI +RFE+ G K+VA K S+ A+ Y +ERPFFN L EF+ SGPV+ EGE + R L+GAT+P+++ PGTIR D A + N HGSD E A EI +F ++V+ Sbjct: 3 LERTLSIIKPDAVAKNVIGEIYARFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVLAHRDLLGATNPKEAAPGTIRADFAESIDANAAHGSDSVENAAIEIAYFFAATEVVS 140
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_STRM5 (Nucleoside diphosphate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = -3 Query: 219 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVN 632 +ERT IKPD V + +I EI +RFE+ G K+VA K S+ A+ Y +ERPFFN L EF+ SGPV+ EGE + R L+GAT+P+++ PGTIR D A + N HGSD E A EI +F ++V+ Sbjct: 3 LERTLSIIKPDAVAKNVIGEIYARFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVLAHRDLLGATNPKEAAPGTIRADFAESIDANAAHGSDSVENAAIEIAYFFAATEVVS 140
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_PSEHT (Nucleoside diphosphate kinase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 61/140 (43.57%), Postives = 86/140 (61.43%), Query Frame = -3 Query: 213 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYT 632 +ERTF +KPD V + I I +RFE G K+VA K+V S+E A+ Y + ERPFF L F++SGPV+ V EGE + R+++GAT+P + GT+R D A + N +HGSD E+A EI +F E+L + T Sbjct: 3 LERTFSIVKPDAVAKNHIGAIYNRFETAGLKIVAAKMVHLSQEKAEGFYAEHSERPFFGALVSFMTSGPVMVTVLEGENAVLKNREIMGATNPADALAGTLRADYADSIDENAVHGSDAVESAAREIAYFFADEELCSRT 142
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_MARMM (Nucleoside diphosphate kinase OS=Maricaulis maris (strain MCS10) GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 60/137 (43.80%), Postives = 86/137 (62.77%), Query Frame = -3 Query: 222 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 632 ++RTF IKPD R L I ++ E G +++A K + S+E A+ Y KERPFFN L F+ SGPV+ V EGE I R ++GAT+P++++ GTIR D A + N +HGSD PETA +EI +F +++V Sbjct: 3 IQRTFSIIKPDATARNLTGAINAKIEAAGLRIIAQKRIRLSREQAEGFYGVHKERPFFNDLVTFMISGPVVVQVLEGEDAIAKYRTVMGATNPEQADAGTIRKDFAESIEANSVHGSDAPETAAEEIPFFFSDDEIV 139
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_JANMA (Nucleoside diphosphate kinase OS=Janthinobacterium sp. (strain Marseille) GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 63/131 (48.09%), Postives = 81/131 (61.83%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 632 +ERT IKPD V + +I +I SRFE G K+VA ++ S+ A+ Y RPFF L +F+ SGPVI V EGE I R L+GATDP+K++ GTIR D A + N +HGSD ETAK EI +F Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVAARMTQLSRAEAEGFYAVHSARPFFKDLVDFMISGPVIIQVLEGENAIIKHRDLMGATDPKKADKGTIRADFADSIDANAVHGSDAEETAKVEIAYYF 133 The following BLAST results are available for this feature:
BLAST of CF833984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833984 ID=CF833984; Name=CF833984; organism=Citrus sinensis; type=EST; length=832bpback to top |