CF833984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_HERAR (Nucleoside diphosphate kinase OS=Herminiimonas arsenicoxydans GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 62/131 (47.33%), Postives = 81/131 (61.83%), Query Frame = -3 Query: 240 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 632 +ERT IKPD V + +I +I SRFE G K++A ++ S+ A+ Y RPFF L +F+ SGPV+ V EGE I R L+GATDP+K+E GTIR D A + N +HGSD ETAK EI +F Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIIAARMAQLSRAEAEGFYAVHSARPFFKDLVDFMISGPVMIQVLEGENAIAKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAEETAKVEIAYYF 133
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_HELP2 (Nucleoside diphosphate kinase OS=Helicobacter pylori (strain P12) GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = -3 Query: 225 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 629 +RT IKPD +++ ++ +II RFE G ++VA+K + S + A+ Y +ERPFF L EF+ SGPV+ MV EGE + R L+GATDP+ ++ GTIR D A + N +HGSD E A +EI +F DL Sbjct: 3 QRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGEDAVAKNRDLMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFATRDL 137
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_HELHP (Nucleoside diphosphate kinase OS=Helicobacter hepaticus GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 ME+T IKPD V++G+I +II RFE ++ A+K + ++ A+ Y KERPFF L +F+ SGPV+ MV EG + R L+GAT+P+++E GTIR D A + N +HGSD E AK+EI +F ++ Sbjct: 1 MEQTLSIIKPDAVKKGVIGKIIDRFESNNLRICAMKKLQLTRCDAEAFYAIHKERPFFKDLVDFMISGPVVVMVLEGNNAVMKNRDLMGATNPKEAEAGTIRADFAQSIDANAVHGSDSLENAKNEIAFFFSTREI 136
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_EDWI9 (Nucleoside diphosphate kinase OS=Edwardsiella ictaluri (strain 93-146) GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 56/136 (41.18%), Postives = 88/136 (64.71%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF +KP+ V + I I +RFE G K+VA K+V ++E A+ Y + +ERPFF+GL F++SGP++ V EG + R+++GAT+P+ + GT+R D A + N +HGSD P +A+ EI +F +D+ Sbjct: 3 LERTFSIVKPNAVAKNAIGAIYARFESAGLKIVAAKMVHLTREQAEGFYAEHRERPFFDGLVTFMTSGPIMVQVLEGNDAVRRNREIMGATNPESALAGTLRADYADSLTENAVHGSDSPASAEREIAYFFSADDI 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_CHLAB (Nucleoside diphosphate kinase OS=Chlamydophila abortus GN=ndk PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 60/138 (43.48%), Postives = 86/138 (62.32%), Query Frame = -3 Query: 219 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVN 632 ME+T IKPD V + I EII+ FE+ GF++ A+K++ S + A+ Y K RPFF L +F+ SGPV+ MV EG + R+++GAT+PQ++ PGTIR +G N +HGSD E A EI +F ++VN Sbjct: 1 MEQTLSIIKPDSVGKAHIGEIIAIFEKSGFRIAAMKMLHLSVKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGNNAVARNREIMGATNPQEAAPGTIRAQFGESIGINAVHGSDSLENAAIEINYFFSKVEIVN 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_WOLTR (Nucleoside diphosphate kinase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 61/137 (44.53%), Postives = 89/137 (64.96%), Query Frame = -3 Query: 222 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 632 +ERT +KPD V+ +I I S E+ G +++A K+++ +K+ A+ Y K+RPFF GL EF++SGPVI V GE I+ R+++GATDP++++ GTIRGD A V N +HGSD E A EI +F +LV Sbjct: 3 IERTLSILKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQADKGTIRGDFADDVNENRVHGSDSLENAHKEIAFFFAECELV 139
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SULDN (Nucleoside diphosphate kinase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 MERT IKPD V +G++ +I+ RFE G K+ A + + S+ A+ Y ERPFF L +F+ SGPV+ V EGEG + R L+GAT+P+++E GTIR D A + N +HGSD E A EI +F ++ Sbjct: 1 MERTLSIIKPDAVAKGVVGKILDRFESNGLKIAATRKMQLSRADAEAFYAVHSERPFFGDLVDFMISGPVVVSVLEGEGALIKNRNLMGATNPKEAEAGTIRADFAENIDANAVHGSDSLENAAVEIAFFFSEREI 136
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SPHWW (Nucleoside diphosphate kinase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = -3 Query: 222 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 629 ERTF IKPD +R L I ++ E G ++VA K + +KE A+ Y +ERPFF L F+ SGPV+ V EGE + R+++GAT+P ++ GTIR A + N +HGSD E AK EI +FKPE++V Sbjct: 4 ERTFSIIKPDATRRNLTGAITAKLEEAGLRVVASKRIHMTKEQAEGFYGVHRERPFFGDLVSFMISGPVVVQVLEGENAVARNREVMGATNPANADEGTIRKTFAESIEANSVHGSDSAENAKIEIDFFFKPEEIV 139
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SHEWM (Nucleoside diphosphate kinase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF IKPD V + I I +RFE G K++A K+V SKE A+ Y + ERPFF L F++SGP++ EGE + R ++GAT+P ++ PGTIR D A + N HGSD +A+ E+ +F E+L Sbjct: 3 IERTFSIIKPDAVAKNNIGAIYNRFETAGLKIIASKMVHLSKEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHRDILGATNPAEAAPGTIRADFAESIDENAAHGSDSVASAEREVAYFFSAEEL 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_RHILO (Nucleoside diphosphate kinase OS=Rhizobium loti GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = -3 Query: 222 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 632 +ERTF IKPD +R L I E G +++A + V S+ A+ Y K+RPFF L EF+SS P I V EGE I R+++GAT+P + GTIR A+ +G N +HGSD PETA EIK WF ++V Sbjct: 3 LERTFSMIKPDATRRNLTGAITKMLEDAGLRVIASRRVWMSRREAEGFYAVHKDRPFFGELVEFMSSAPTIVQVLEGENAIARNREVMGATNPANAAEGTIRKVHALSIGENSVHGSDAPETAAQEIKYWFSDTEIV 139 The following BLAST results are available for this feature:
BLAST of CF833984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833984 ID=CF833984; Name=CF833984; organism=Citrus sinensis; type=EST; length=832bpback to top |