CF833984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_PHOLL (Nucleoside diphosphate kinase OS=Photorhabdus luminescens subsp. laumondii GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 58/136 (42.65%), Postives = 87/136 (63.97%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF IKP+ V++ I I +RFE GFK++A K++ ++E A+ Y + K RPFF+GL EF++SGP++ V EGE + R L+GAT+P + GT+R D A N +HGSD E+A EI +F +++ Sbjct: 3 VERTFSIIKPNAVKKNAIGAIYARFESAGFKIIAAKMLHLTREQAEGFYAEHKGRPFFDGLVEFMTSGPIVVQVLEGENAVQRHRDLMGATNPDNALAGTLRADYADSFTENAVHGSDAVESANREIAYFFTEDEI 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_NOVAD (Nucleoside diphosphate kinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 61/135 (45.19%), Postives = 82/135 (60.74%), Query Frame = -3 Query: 222 RTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 626 RTF IKPD +R L + E G ++VA K + S+E A+ Y KERPFF L EF+ SGPV+ V EGE + R ++GAT+P+ + PGTIR +LA + N +HGSD E A EI +FKPE++V Sbjct: 5 RTFSIIKPDATRRNLTGAVTKMLEEAGLRVVASKRIHMSREQAEGFYAVHKERPFFGELVEFMISGPVVVQVLEGEDAVKRNRDIMGATNPKDAAPGTIRKELAESIEANSVHGSDSEENAAIEIAYFFKPEEIV 139
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_GEOMG (Nucleoside diphosphate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 55/137 (40.15%), Postives = 86/137 (62.77%), Query Frame = -3 Query: 222 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 632 MERTF IKPD V+R ++ +++ + E GF++V +K + SK+ A+ Y+ ERPFF LC F+S PV+ + E E I R+++GAT+P ++ GTIR + + + N +HGSD PE+A EI +F +L+ Sbjct: 1 MERTFAIIKPDAVERNIVGKVLEKIEAAGFRIVGMKKIQLSKKEAEGFYYVHSERPFFGDLCSFMSRSPVVVLALERENAIAKWREVMGATNPANADAGTIRKEFGLSIEENTVHGSDSPESAAFEIPYFFSQLELL 137
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_BARHE (Nucleoside diphosphate kinase OS=Bartonella henselae GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 62/137 (45.26%), Postives = 83/137 (60.58%), Query Frame = -3 Query: 222 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 632 +ERTF IKPD +R L I E G +++A K V S+ A+K Y KER FF+ L E +SSGP I V EGE I R+++GAT+P+ ++ GTIR A+ +G N +HGSD ETAK EI WF ++V Sbjct: 3 VERTFSMIKPDATRRNLTGAITKMLEDAGLRVIASKRVWMSQREAEKFYAVHKERAFFSELVELMSSGPTIVQVLEGENAIAKNREVMGATNPEDAQEGTIRKVHALSIGENSVHGSDSAETAKTEIAFWFSEVEIV 139
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_AGRRK (Nucleoside diphosphate kinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = -3 Query: 222 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 632 +ERTF IKPD +R L I FE G +++A K V SK A+ Y KERPFF L + ++SGP + V EGEG I R+++GAT+P + GTIR A+ +G N +HGSD PETA EI WF ++V Sbjct: 3 IERTFSMIKPDATKRNLTGAITKIFEDNGLRVIASKRVWMSKREAEGFYAVHKERPFFGELVDGMTSGPTVVQVLEGEGAILKNREIMGATNPANAAEGTIRKIHALSIGENSVHGSDAPETAAVEIAYWFSETEIV 139
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_ACIF5 (Nucleoside diphosphate kinase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERT IKPD VQ+ I I+ RFE+ G ++ A K++ S++ A Y + RPF+ LC+F+SSGPV+ V EGEG I R L+GAT+P+ + GTIR D A + N +HGSD ETA EI +F ++ Sbjct: 3 VERTLSIIKPDAVQKNAIGAILGRFEKAGLRIAAAKMLHLSRDDAGGFYAVHQARPFYGELCDFMSSGPVLVTVLEGEGAIAKNRDLMGATNPKDAAAGTIRADFADSIDANAVHGSDSAETAAWEISYFFGQREI 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_ACIF2 (Nucleoside diphosphate kinase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=ndk PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26 Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERT IKPD VQ+ I I+ RFE+ G ++ A K++ S++ A Y + RPF+ LC+F+SSGPV+ V EGEG I R L+GAT+P+ + GTIR D A + N +HGSD ETA EI +F ++ Sbjct: 3 VERTLSIIKPDAVQKNAIGAILGRFEKAGLRIAAAKMLHLSRDDAGGFYAVHQARPFYGELCDFMSSGPVLVTVLEGEGAIAKNRDLMGATNPKDAAAGTIRADFADSIDANAVHGSDSAETAAWEISYFFGQREI 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_LEPIN (Nucleoside diphosphate kinase OS=Leptospira interrogans GN=ndk PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.250e-26 Identity = 58/136 (42.65%), Postives = 86/136 (63.24%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 M RTFI IKPDGV+ + I+SR E++GFK++ +K + S E A++ Y RPF+N LC ++SSGP++A E + + + R++IGATDP+++ GTIR A N +HGSD + A EI +FK +L Sbjct: 1 MSRTFIMIKPDGVKNKHVGNILSRIEKEGFKILGLKYLKLSLEDAKQFYKVHSARPFYNDLCNYMSSGPIVAAALERDNAVLHWREVIGATDPKEAAAGTIRALYAESKEANAVHGSDSDDNAALEISFFFKGNEL 136
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_LEPIC (Nucleoside diphosphate kinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ndk PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.250e-26 Identity = 58/136 (42.65%), Postives = 86/136 (63.24%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 M RTFI IKPDGV+ + I+SR E++GFK++ +K + S E A++ Y RPF+N LC ++SSGP++A E + + + R++IGATDP+++ GTIR A N +HGSD + A EI +FK +L Sbjct: 1 MSRTFIMIKPDGVKNKHVGNILSRIEKEGFKILGLKYLKLSLEDAKQFYKVHSARPFYNDLCNYMSSGPIVAAALERDNAVLHWREVIGATDPKEAAAGTIRALYAESKEANAVHGSDSDDNAALEISFFFKGNEL 136
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_HELPS (Nucleoside diphosphate kinase OS=Helicobacter pylori (strain Shi470) GN=ndk PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.250e-26 Identity = 58/135 (42.96%), Postives = 86/135 (63.70%), Query Frame = -3 Query: 225 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 629 +RT IKPD +++ ++ +II RFE G +++A+K + S + A+ Y +ERPFF L EF+ SGPV+ MV EG+ + R L+GATDP+ ++ GTIR D A + N +HGSD E A++EI +F DL Sbjct: 3 QRTLSIIKPDALKKKVVGKIIDRFESNGLEVIAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRDLMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENARNEIAFFFAARDL 137 The following BLAST results are available for this feature:
BLAST of CF833984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833984 ID=CF833984; Name=CF833984; organism=Citrus sinensis; type=EST; length=832bpback to top |