CF833984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SHEB8 (Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS185) GN=ndk PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.237e-25 Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF IKPD V + I I +RFE G K+VA K++ +KE A+ Y + ER FF L F++SGP++ V EGE + R+++GAT+P ++ PGTIR D A + N HGSD E+A EI +F E+L Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHGSDAVESAAREIAYFFSAEEL 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SHEB5 (Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=ndk PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.237e-25 Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF IKPD V + I I +RFE G K+VA K++ +KE A+ Y + ER FF L F++SGP++ V EGE + R+++GAT+P ++ PGTIR D A + N HGSD E+A EI +F E+L Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHGSDAVESAAREIAYFFSAEEL 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SHEB2 (Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS223) GN=ndk PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.237e-25 Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF IKPD V + I I +RFE G K+VA K++ +KE A+ Y + ER FF L F++SGP++ V EGE + R+++GAT+P ++ PGTIR D A + N HGSD E+A EI +F E+L Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHGSDAVESAAREIAYFFSAEEL 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_HELPY (Nucleoside diphosphate kinase OS=Helicobacter pylori GN=ndk PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.237e-25 Identity = 59/135 (43.70%), Postives = 85/135 (62.96%), Query Frame = -3 Query: 225 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 629 +RT IKPD +++ ++ +II RFE G ++VA+K + S + A+ Y +ERPFF L EF+ SGPV+ MV EG+ + R L+GATDP+ ++ GTIR D A + N +HGSD E A +EI +F DL Sbjct: 3 QRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRDLMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAARDL 137
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_ANAMM (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain St. Maries) GN=ndk PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.237e-25 Identity = 59/143 (41.26%), Postives = 88/143 (61.54%), Query Frame = -3 Query: 201 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAE 629 E+T +KPD V+RG+I ++S E G ++VA ++ S E A+ Y K RPFF L F++SGPV+ V GE + R ++GAT+P ++ PGTIRGDLA + N +HGSD E A+ EIK +FK ++++ N + Sbjct: 4 EKTLSILKPDVVERGIIGRVLSYIEAAGLRIVAQRMCALSHEQAEAFYAVHKARPFFPSLVGFMTSGPVVVQVLVGESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEIMSSMPNGK 146
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_ANAMF (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain Florida) GN=ndk PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.237e-25 Identity = 59/143 (41.26%), Postives = 88/143 (61.54%), Query Frame = -3 Query: 201 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAE 629 E+T +KPD V+RG+I ++S E G ++VA ++ S E A+ Y K RPFF L F++SGPV+ V GE + R ++GAT+P ++ PGTIRGDLA + N +HGSD E A+ EIK +FK ++++ N + Sbjct: 4 EKTLSILKPDVVERGIIGRVLSYIEAAGLRIVAQRMCALSHEQAEAFYAVHKARPFFPSLVGFMTSGPVVVQVLVGESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEIMSSMPNGK 146
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_ACTSZ (Nucleoside diphosphate kinase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=ndk PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.237e-25 Identity = 59/136 (43.38%), Postives = 89/136 (65.44%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERT IKPD V+R L+ +I+SRFE GF++VA+K++ ++ A+ Y + + +PFF+GL E+++S PV+ V E + + R LIGATDPQ++ GTIR D A RN +HGSD E+A EI +F ++ Sbjct: 3 LERTLSIIKPDAVERNLVGKILSRFEENGFQIVAMKMLRLNQAQAEGFYAEHQGKPFFDGLVEYMTSAPVVVSVLEKDNAVKDYRTLIGATDPQQAAEGTIRKDFAESRRRNSVHGSDSEESAVREIAYFFVESEI 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_YERE8 (Nucleoside diphosphate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ndk PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.615e-25 Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF IKP+ V + I I +RFE GFK++A K++ +KE A+ Y + K RPFF+GL EF++SGPV+ V EGE + R ++GAT+P + GT+R D A N +HGSD E+A+ EI +F ++ Sbjct: 3 VERTFSIIKPNAVAKNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPVMIQVLEGENAVQRHRDIMGATNPDNALAGTLRADFADSFTENAVHGSDAVESAQREIAYFFSENEI 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SHEAM (Nucleoside diphosphate kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ndk PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.615e-25 Identity = 57/136 (41.91%), Postives = 85/136 (62.50%), Query Frame = -3 Query: 225 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 632 +ERTF IKPD V + I I +RFE G K++A K+V +KE A+ Y + ERPFF L F++SGP++ V EGE + R+++GAT+P ++ GT+R D A + N +HGSD +A+ EI +F ++L Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFESAGLKIIAAKMVHLTKEQAEGFYAEHSERPFFGALVSFMTSGPIMVQVLEGENAVLANREIMGATNPAQAARGTLRADYAASIDENAVHGSDALASAEREIAYFFAADEL 138
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_RHOSU (Nucleoside diphosphate kinase OS=Rhodovulum sulfidophilum GN=ndk PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.615e-25 Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = -3 Query: 222 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 632 ++RTF IKPD +R L I ++ E G ++VA K + SK A Y KERPF++ LCEF++S P++ V EGE I R+++GAT+P ++ GTIR + A+ +G N +HGSD +TAK+EI +F +LV Sbjct: 3 IQRTFSIIKPDATKRNLTGAINAKLEAAGLRIVAQKRIHLSKAQAAVFYAVHKERPFYDELCEFMASEPIVVQVLEGEDAIAKNREVMGATNPAEAAEGTIRKEFALSIGENSVHGSDAEDTAKEEIAYFFSGLELV 139 The following BLAST results are available for this feature:
BLAST of CF833984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833984 ID=CF833984; Name=CF833984; organism=Citrus sinensis; type=EST; length=832bpback to top |