CF833984

Overview
NameCF833984
Unique NameCF833984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.095e-49
Identity = 90/148 (60.81%), Postives = 115/148 (77.70%), Query Frame = -3
Query:  186 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 629
            E+TFI IKPDGVQRGL+ EIISRFE+KGF L  +K V   + FA+KHY DL  +PFF+GL +++ SGPV+AM+WEG+ V+T GRK+IGAT+P +SEPGTIRGD A+ +GRN+IHGSD  E+A  EI LWF PE   N+ S+   W+YE
Sbjct:    3 EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWF-PEGAANWESSLHSWIYE 149          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_CYAA5 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain ATCC 51142) GN=ndk PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.573e-49
Identity = 92/149 (61.74%), Postives = 113/149 (75.84%), Query Frame = -3
Query:  186 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 632
            MERTFI IKPDGVQRGL+ E+I RFE KGF LV +K++  SKE A++HY   KERPFF  L EF+ S PV+AMVWEG+GV+   RKLIGAT+P  +EPGTIRGD  V VGRN+IHGSD  ETA+ EI LWF  ++L ++   A+ W+YE
Sbjct:    1 MERTFIMIKPDGVQRGLVGEVIGRFEAKGFTLVGLKLMSVSKELAEEHYDVHKERPFFGSLVEFICSSPVVAMVWEGDGVVASARKLIGATNPLSAEPGTIRGDFGVSVGRNLIHGSDAIETAQREISLWFNEKELSSWEPTAKTWLYE 149          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SYNY3 (Nucleoside diphosphate kinase OS=Synechocystis sp. (strain PCC 6803) GN=ndk PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.667e-49
Identity = 90/149 (60.40%), Postives = 113/149 (75.84%), Query Frame = -3
Query:  186 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 632
            MERTFI IKPDGVQR LI EI+ RFE+KGFKLVA+K++  S+E A+KHY  L ++PFF+GL  F+ S PV+AMVWEG  +++  R++IGATDP  + PGTIRGD  V VGRNIIHGSD  ETAK EI LWFK E++  + +    W+YE
Sbjct:    1 MERTFIMIKPDGVQRQLIGEIVGRFEKKGFKLVAMKVMTVSQELAEKHYEALNDKPFFSGLVNFICSSPVVAMVWEGNSIVSTSRQMIGATDPHAAAPGTIRGDYGVSVGRNIIHGSDAIETAKREISLWFKDEEVNEWDATLNPWLYE 149          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDKA_DROME (Nucleoside diphosphate kinase OS=Drosophila melanogaster GN=awd PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 4.667e-49
Identity = 91/152 (59.87%), Postives = 114/152 (75.00%), Query Frame = -3
Query:  186 AAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 641
            AA  ERTFI +KPDGVQRGL+ +II RFE+KGFKLVA+K    SKE  +KHY DL  RPFF GL  +++SGPV+ MVWEG  V+  GR+++GAT+P  S PGTIRGD  + VGRNIIHGSD  E+A+ EI LWF  ++LV +T  A+ W+YE
Sbjct:    2 AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 153          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.095e-49
Identity = 88/149 (59.06%), Postives = 116/149 (77.85%), Query Frame = -3
Query:  186 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 632
            ME+TFI IKPDGVQ GL+ EII RFE+KGF L  +K++   + FA+KHY DL  +PFFNGL E++ SGPV+AMVWEG+ V+T GR++IGAT+P +S PGTIRGD A+ +GRN+IHGSD  E+A+  I LWF PE + N++S+   W+YE
Sbjct:    1 MEQTFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWF-PEGVANWSSSLHPWIYE 148          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SYNP2 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndk PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.960e-49
Identity = 88/149 (59.06%), Postives = 113/149 (75.84%), Query Frame = -3
Query:  186 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 632
            MERTF+ +KPDGVQRGL+ ++I RFE KGFKLV +K+V  S+E A++HY   +ERPFF  L EF+ S PV+AMVWEG+G I   RK+IGAT+P ++EPGTIRGD  V +GRN+IHGSDGP+TA  EI LWF   +L N+    + W+YE
Sbjct:    1 MERTFVMVKPDGVQRGLVGDVIRRFEAKGFKLVGLKLVSVSRELAEQHYGVHRERPFFGSLVEFIISVPVVAMVWEGKGAIAAARKIIGATNPLEAEPGTIRGDFGVDIGRNLIHGSDGPDTAASEIALWFSESELANWEPATKAWLYE 149          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.040e-48
Identity = 88/150 (58.67%), Postives = 116/150 (77.33%), Query Frame = -3
Query:  183 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYES 632
            ME+TFI IKPDGVQRGLI E+I RFE+KGF L  +K++   + FA+KHY DL  + FF+GL +++ SGPV+AM+WEG+ V+  GRK+IGAT+P  SEPGTIRGD A+ +GRN+IHGSD  E+A+ EI LWF P+  VN+ S+   WVYE+
Sbjct:    1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWF-PDGPVNWQSSVHPWVYET 149          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_ASPFU (Nucleoside diphosphate kinase OS=Aspergillus fumigatus GN=ndk1 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.358e-48
Identity = 90/148 (60.81%), Postives = 112/148 (75.68%), Query Frame = -3
Query:  186 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 629
            E+TFIAIKPDGVQRGLI  IISRFE +GFKLVA+K+V P +   ++HY DL ++PFF GL  ++ SGP+ AMVWEG  V+  GR ++GAT+P  S PGTIRGD A+ VGRN+ HGSD  E AK EI LWFKPE+L+++ S    WVYE
Sbjct:    4 EQTFIAIKPDGVQRGLIGPIISRFENRGFKLVAMKLVSPPQSQLEQHYADLSDKPFFKGLVSYMLSGPICAMVWEGRDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVENAKKEIALWFKPEELISWKSATFDWVYE 151          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_CARHZ (Nucleoside diphosphate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=ndk PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.025e-48
Identity = 87/149 (58.39%), Postives = 117/149 (78.52%), Query Frame = -3
Query:  186 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 632
            MERTFI +KPDGVQRGL+ EIISRFE++GFKLV +K++  S+E A+ HY + K +PFF GL  F++SGPV+AMVWEG+ VI   R+++GAT+P K++PGTIRG   + VGRN+IHGSD PE+A  EI L+FK E+L++Y    + W+YE
Sbjct:    1 MERTFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGLLNFITSGPVVAMVWEGKEVIATAREMMGATNPLKAQPGTIRGTYGIDVGRNVIHGSDSPESAAREIALFFKEEELLSYEKTLDTWIYE 149          
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDKA_DROYA (Nucleoside diphosphate kinase (Fragment) OS=Drosophila yakuba GN=awd PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.025e-48
Identity = 89/148 (60.14%), Postives = 112/148 (75.68%), Query Frame = -3
Query:  186 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 629
            ERTFI +KPDGVQRGL+ +II RFE+KGFKLVA+K    SKE  +KHY DL  RPFF GL  +++SGPV+ MVWEG  V+  GR+++GAT+P  S PGTIRGD  + VGRNIIHGSD  E+A+ EI LWF  ++LV +T  A+ W+YE
Sbjct:    3 ERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 150          
The following BLAST results are available for this feature:
BLAST of CF833984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_PEA2.095e-4960.81Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]
NDK_CYAA53.573e-4961.74Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]
NDK_SYNY34.667e-4960.40Nucleoside diphosphate kinase OS=Synechocystis sp.... [more]
NDKA_DROME4.667e-4959.87Nucleoside diphosphate kinase OS=Drosophila melano... [more]
NDKA_FLABI6.095e-4959.06Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK_SYNP27.960e-4959.06Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK1_ARATH1.040e-4858.67Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDK_ASPFU1.358e-4860.81Nucleoside diphosphate kinase OS=Aspergillus fumig... [more]
NDK_CARHZ3.025e-4858.39Nucleoside diphosphate kinase OS=Carboxydothermus ... [more]
NDKA_DROYA3.025e-4860.14Nucleoside diphosphate kinase (Fragment) OS=Drosop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04K21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04K21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833984 ID=CF833984; Name=CF833984; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTTTTTTTTTTTTGGTGTAGCAAATTATTGCCGAAATTCCACTTTT
GGATCGTAACAAAGTTGTGTTTTACCTCATCTCAACAGAAACAATTTTAT
TCCACCAATTTATGCTTCTAATCCCACTATTCATGTGGGACCTAAGTTTC
TAATAAAAGTAAGAGAAAAATTGTAATCACTTGGATTCATAGACCCACTT
CTCTGCATTGCTTGTGTAATTAACCAAGTCTTCGGGTTTGAACCACAATT
TAATCTCATCCTTGGCGGTCTCGGGGCCATCACTTCCATGAATGATGTTT
CTTCCAACAACAACAGCTAGATCGCCTCTGATTGTTCCAGGTTCTGATTT
CTGAGGATCTGTGGCTCCAATGAGTTTGCGACCATACGTAATAACTCCCT
CTCCTTCCCATACCATGGCAATGACTGGACCAGAGCTAAGGAACTCGCAC
AGGCCATTAAAGAAGGGTCTTTCCTTCAGATCATGATAATGTTTTTGTGC
AAACTCTTTTGATGGAACTACTATCTTAATGGCCACAAGCTTAAAGCCTT
TGCGCTCAAAGCGAGAGATGATTTCTGAAATCAGTCCTCTTTGCACCCCA
TCTGGCTTGATGGCAATGAAAGTGCGTTCCATCTCTGCAGCATGTACTTC
CTGCTCCTGGAGCGTGTAAGCTGCAGCAGGAATTGCAATGGCTCCCGAGA
GCCATGATCGAGATGCAGTTGAGGAACCAGCCCTCCCAAAACTTGAAACA
AGATAAGGCAACTTCCCACTGAATGTAACTGCCGCTGCAGCAGATACAGC
TCGCCCTTCGGAGTAAAAGCGCGAATTCTTGG
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