CF833984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.904e-44 Identity = 81/149 (54.36%), Postives = 117/149 (78.52%), Query Frame = -3 Query: 186 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 632 MERT++ +KPDGVQRGLI +IIS+FE+KG+K+V +K++ S+E A++HY + +PFFNGL +F++SGPV+AMV EG+ V+T R+++GAT+P K+ PGTIR V VGRNIIHGSD E+A+ EI ++FK E+L++Y + W+YE Sbjct: 1 MERTYLMVKPDGVQRGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGRNIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_BREBN (Nucleoside diphosphate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ndk PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.710e-44 Identity = 79/147 (53.74%), Postives = 110/147 (74.83%), Query Frame = -3 Query: 192 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWV 632 ME+TF+ +KPDGVQR LI EI+SRFE+KG++LV K++ S+E A++HY + KERPFF L +F++SGPV AMVW+G VIT R ++G T+P + GTIRGD A VG NIIHGSD PE+A+ EI LWF E+++++ ++W+ Sbjct: 1 MEKTFLMVKPDGVQRNLIGEIVSRFEKKGYQLVGAKLMTVSRELAEEHYAEHKERPFFGELVDFITSGPVFAMVWQGNNVITTARAMMGKTNPVDAASGTIRGDFATSVGMNIIHGSDSPESAEREIGLWFSAEEVLSFEKTIQRWI 147
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SYMTH (Nucleoside diphosphate kinase OS=Symbiobacterium thermophilum GN=ndk PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.315e-43 Identity = 82/148 (55.41%), Postives = 113/148 (76.35%), Query Frame = -3 Query: 189 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVY 632 MER+F+ +KPDGVQRGLI E+ISR ER+G KLVA K++ S+E A++HY LK++PFF L EF++SGPV+AMVWEG I+ RK +GAT+P +EPGTIR D A V N++HGSDGPE+A+ EI+LWF E +Y+ + ++W++ Sbjct: 1 MERSFVMVKPDGVQRGLIGEVISRLERRGLKLVAAKLMRVSRELAEEHYAQLKDKPFFPSLIEFITSGPVMAMVWEGPNAISIIRKTMGATNPANAEPGTIRADFACDVSYNVVHGSDGPESAEREIRLWF-GEVEPSYSRSVDRWIF 147
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_BRUMA (Nucleoside diphosphate kinase OS=Brugia malayi GN=NDK PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.718e-43 Identity = 82/148 (55.41%), Postives = 109/148 (73.65%), Query Frame = -3 Query: 186 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 629 ERTFI IKPD VQRGLI +I RFE++G+KLVA+K++ +K + HY +L+ +PFFN L ++SSGPVIAMVWEG V+ R+++GAT+P S PGTIRGD ++ GRNI+HGSD +A+ EI WFKPE+L ++S WVYE Sbjct: 6 ERTFICIKPDAVQRGLIGKIFERFEQRGYKLVAMKMLKATKSHLEIHYQELQGKPFFNDLVGYMSSGPVIAMVWEGLDVVKQARQMLGATNPLNSMPGTIRGDFSIQTGRNIVHGSDSLPSAEREITHWFKPEELCEWSSATATWVYE 153
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.827e-43 Identity = 79/148 (53.38%), Postives = 107/148 (72.30%), Query Frame = -3 Query: 189 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVY 632 ME+TF+ +KPDGVQR LI EI+ RFE KG+KL K++ S + A+ HY + KERPFF L +F++SGPV AMVWEGE VI RK++G T+P +++P TIRGD + VG+NIIHGSD E+A+ EI L+F ++V+Y A W+Y Sbjct: 1 MEKTFLMVKPDGVQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVGKNIIHGSDSAESAEREITLFFTENEIVSYEKQANNWIY 148
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_HELMI (Nucleoside diphosphate kinase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=ndk PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.527e-43 Identity = 78/149 (52.35%), Postives = 114/149 (76.51%), Query Frame = -3 Query: 186 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 632 MERT++ IKPDGVQRGL+ EIISRFE+KGFKLV +K + ++E A+KHY + +PFF GL +++ SGPV+AM WEG+ +++ R+++GAT+P K+ PGTIRG AV +GRNIIHGSD P +A+ E+ ++F+ ++LV + + W+ E Sbjct: 1 MERTYLMIKPDGVQRGLVGEIISRFEKKGFKLVGMKFLRLTREMAEKHYAEHVGKPFFAGLVDYIISGPVVAMCWEGKDIVSVSREMMGATNPAKAAPGTIRGTYAVDIGRNIIHGSDSPASAERELAIYFQSDELVEWDRTLQGWLTE 149
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_ARCFU (Nucleoside diphosphate kinase OS=Archaeoglobus fulgidus GN=ndk PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.527e-43 Identity = 76/151 (50.33%), Postives = 114/151 (75.50%), Query Frame = -3 Query: 180 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYESK 632 MERTF+ +KPDGVQRGL+ E+I R ERKG K+VA+K++ ++E A+ HY + +E+PFF+ L ++++SGPV+AMV EG+ I R L+GAT+P ++ PGTIRGD + VGRN++H SD P++A+ EI L+F +++VN+ E W+YE + Sbjct: 1 MERTFVMVKPDGVQRGLVGEVIGRLERKGLKIVAMKMLWIAREMAENHYAEHREKPFFSALVDYITSGPVVAMVVEGKNAIKVVRTLVGATNPAEAAPGTIRGDFGLDVGRNVVHASDSPQSAEREISLFFSDDEIVNWEKADEDWIYEER 151
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_BACCR (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ndk PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.525e-43 Identity = 78/148 (52.70%), Postives = 110/148 (74.32%), Query Frame = -3 Query: 189 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVY 632 ME+TF+ +KPDGVQR I EI++RFE+KGF+LV K++ + E A +HY + KE+PFF L +F++SGPV AMVW+GEGV+ R ++G T P ++ PGTIRGD V V +NIIHGSD E+A+ EI ++FK E+LV+Y+ +W+Y Sbjct: 1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHKEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIAIFFKEEELVDYSKLMNEWIY 148
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_SCHPO (Nucleoside diphosphate kinase OS=Schizosaccharomyces pombe GN=ndk1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.454e-42 Identity = 78/148 (52.70%), Postives = 108/148 (72.97%), Query Frame = -3 Query: 186 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 629 E+TFIA+KPD VQRGLI IIS+FE KG+KL A+K +VPS++ ++HY + K +PF+ L F++SGPV AM+WEG+ + GR ++GA++P S PGTIRGD + +GRN+ HGSD E+A EIKLWF+P ++ Y E W+YE Sbjct: 4 EQTFIAVKPDAVQRGLIGYIISKFELKGYKLRALKFLVPSRDLVEEHYAEHKGKPFYEKLVGFMASGPVCAMIWEGKQAVKTGRLMLGASNPLDSAPGTIRGDYGIDLGRNVCHGSDSIESANREIKLWFQPSEIQVYDRTIEPWIYE 151
BLAST of CF833984 vs. ExPASy Swiss-Prot
Match: NDK_UNCMA (Nucleoside diphosphate kinase OS=Uncultured methanogenic archaeon RC-I GN=ndk PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.231e-42 Identity = 79/150 (52.67%), Postives = 109/150 (72.67%), Query Frame = -3 Query: 186 EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 635 E ERTF+ +KPDGVQRGL+ EIISRFER+G K+V +K++ S+E A++HY + +PFF GL F+ SGP +AMV EG+ ++ R ++G T P +S PGTIRGD A+ +GRN+IH SD PE+AK EI L+FK ++ Y E+W+YE Sbjct: 3 ERERTFVMVKPDGVQRGLVGEIISRFERRGLKIVGMKMLEVSEELAKQHYAEHAAKPFFPGLVSFIRSGPTVAMVIEGKDAVSMVRSMLGKTKPIESAPGTIRGDFALDMGRNVIHASDSPESAKREISLYFKTSEIATYARIDEQWLYE 152 The following BLAST results are available for this feature:
BLAST of CF833984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833984 ID=CF833984; Name=CF833984; organism=Citrus sinensis; type=EST; length=832bpback to top |