CF833990

Overview
NameCF833990
Unique NameCF833990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10563 contig Csv1_Contig10563:709..1312. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 4.803e-35
Identity = 72/138 (52.17%), Postives = 95/138 (68.84%), Query Frame = -3
Query:   15 NSLPPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHSN-QNLHGQGTPL---TESERQGLRDDIERLKKKKKV 416
            NS+PPFL+KTY+M               N SF+VW+ P+F++ LLPKYFKHNNFSSF+RQLNTYGFRKVDP++WEFANE F+RG+ + LK+I RRKP H   N Q    Q + +    E  + G+ +++ERLK+ K V
Sbjct:   23 NSVPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEVGKFGIEEEVERLKRDKNV 160          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.273e-35
Identity = 72/137 (52.55%), Postives = 92/137 (67.15%), Query Frame = -3
Query:   21 GQGSSNSLPPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHSNQNLHGQGTPLTESERQGLRDDIERLKKKK 431
            G+G+    P FL KTYEM              +N SFIVWN  +F+R LLP YFKHNNFSSFIRQLNTYGFRK+DPE+WEF N+DF++ Q   LKNIHRRKP+HSHS+          T+ ER  L++ +++L ++K
Sbjct:   15 GEGAGGPAP-FLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHSHPPASS-----TDQERAVLQEQMDKLSREK 145          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34
Identity = 71/137 (51.82%), Postives = 90/137 (65.69%), Query Frame = -3
Query:   15 NSLPPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHSNQN---LHGQGTPLTESERQGLRDDIERLKKKKKV 416
            +S+PPFL+KTY+M               N SF+VWN P+FA+  LPKYFKHNNFSSF+RQLNTYGFRKVDP++WEFANE F+RGQ + LK+I RRKP      Q     H       E  + GL +++ERL++ K V
Sbjct:   19 SSIPPFLSKTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQILKSIVRRKPAQVQPPQQPQVQHSSVGACVEVGKFGLEEEVERLQRDKNV 155          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HFA2B_ORYSJ (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.806e-32
Identity = 71/132 (53.79%), Postives = 89/132 (67.42%), Query Frame = -3
Query:   15 PPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRK-PVHSHSNQNLHGQGTPLTESERQGLRDDIERLKKKKKV 407
            PPFL KTY+M              ++ SF+VW+P  FA  LLP++FKHNNFSSF+RQLNTYGFRKVDP++WEFANE+F+RGQ   LKNI RRK P H+ SNQ   G   P  E    G   +I+RLK+ K++
Sbjct:   51 PPFLTKTYDMVDDAGTDAAVSWSATSNSFVVWDPHAFATVLLPRFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANENFLRGQRHLLKNIKRRKPPSHTASNQQSLG---PYLEVGHFGYDAEIDRLKRDKQL 179          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HFA2E_ORYSJ (Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica GN=HSFA2E PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.374e-31
Identity = 67/129 (51.94%), Postives = 83/129 (64.34%), Query Frame = -3
Query:   21 PPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHSNQNLHGQGTPLTESERQGLRDDIERLKKKK 407
            PPFL KTY+M              +N SF+VW+P  F   LLP+YFKHNNFSSF+RQLNTYGFRKVDP++WEFANE F+RGQ   LK+I RRKP +S  +Q   G      E    G   +I++LK+ K
Sbjct:   37 PPFLTKTYDMVDDPTTDAVVSWSATNNSFVVWDPHLFGNVLLPRYFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLRGQKHLLKSIKRRKPPNSSPSQQSLGS---FLEVGHFGYEGEIDQLKRDK 162          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HSFA2_ARATH (Heat stress transcription factor A-2 OS=Arabidopsis thaliana GN=HSFA2 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.354e-29
Identity = 64/127 (50.39%), Postives = 79/127 (62.20%), Query Frame = -3
Query:   27 PPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHSNQNLHGQGTPLTESERQGLRDDIERLKK 407
            PPFL KTYEM                 SF+VW+   F+  LLP+YFKH+NFSSFIRQLNTYGFRK+DP++WEFANE F+ GQ   LKNI RR+ +    N N  G G    E  + G   ++ERLK+
Sbjct:   43 PPFLTKTYEMVEDPATDTVVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNM-GLQNVNQQGSGMSCVEVGQYGFDGEVERLKR 168          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HFA6B_ARATH (Heat stress transcription factor A-6b OS=Arabidopsis thaliana GN=HSFA6b PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.309e-29
Identity = 68/138 (49.28%), Postives = 88/138 (63.77%), Query Frame = -3
Query:   15 PPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHSNQNLHGQGTP-------LTESERQGLRDDIERLKKKKKV 407
            PPFL KTY++              SN SFIVW+P  F+  LLP++FKHNNFSSF+RQLNTYGFRKV+P++WEFANE F+RGQ   LKNI RRK   ++SNQ    Q +          E  R GL  +++ L++ K+V
Sbjct:   60 PPFLTKTYDLVEDSRTNHVVSWSKSNNSFIVWDPQAFSVTLLPRFFKHNNFSSFVRQLNTYGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRK-TSNNSNQMQQPQSSEQQSLDNFCIEVGRYGLDGEMDSLRRDKQV 196          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.015e-29
Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = -3
Query:   15 PPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHSNQNLHGQGTPLTESERQGLRDDIERLKKKKKV 407
            PPFL+KTYEM              +  SFIVW+   F+  LLP++FKH+NFSSFIRQLNTYGFRKVDP++WEFANE F+ GQ   LK I RR+ V    NQ   G G  + E    G+ +++ERLK+ K V
Sbjct:   30 PPFLSKTYEMVEDSSTDQVISWSTTRNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVGQSMNQ--QGSGACI-EIGYYGMEEELERLKRDKNV 157          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.144e-29
Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = -3
Query:   15 PPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHSNQNLHGQGTPLTESERQGLRDDIERLKKKKKV 407
            PPFL KTY++              +  SF+VW+P  FA  LLP+ FKHNNFSSF+RQLNTYGFRKVDP++WEFANE F+RGQ   LK I RRKP  S++  +     T   E    G  ++I+RLK+ K +
Sbjct:   41 PPFLTKTYDLVEDPATDGVVSWSRAGNSFVVWDPHVFADLLLPRLFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKTIKRRKP-PSNAPPSQQQSLTSCLEVGEFGFEEEIDRLKRDKNI 170          
BLAST of CF833990 vs. ExPASy Swiss-Prot
Match: HSFA3_ARATH (Heat stress transcription factor A-3 OS=Arabidopsis thaliana GN=HSFA3 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 8.774e-29
Identity = 63/136 (46.32%), Postives = 91/136 (66.91%), Query Frame = -3
Query:   18 NSLPPFLAKTYEMXXXXXXXXXXXXXXSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGQPERLKNIHRRKPVHSHS---NQNLHGQGTPLTESERQGLRDDIERLKKKKK 416
            N +PPFL+KT+++              +  SF+VW+P +FAR +LP+ FKHNNFSSF+RQLNTYGFRK+D ++WEFANE F+RG+   LKNIHRR+   S+    +     QG+P TE     +  +IE+L+K+++
Sbjct:   51 NPIPPFLSKTFDLVDDPTLDPVISWGLTGASFVVWDPLEFARIILPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFANEAFLRGKKHLLKNIHRRRSPQSNQTCCSSTSQSQGSP-TE-----VGGEIEKLRKERR 180          
The following BLAST results are available for this feature:
BLAST of CF833990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
HFA1B_ARATH4.803e-3552.17Heat stress transcription factor A-1b OS=Arabidops... [more]
HSFA5_ARATH6.273e-3552.55Heat stress transcription factor A-5 OS=Arabidopsi... [more]
HFA1E_ARATH1.070e-3451.82Heat stress transcription factor A-1e OS=Arabidops... [more]
HFA2B_ORYSJ3.806e-3253.79Heat stress transcription factor A-2b OS=Oryza sat... [more]
HFA2E_ORYSJ9.374e-3151.94Heat stress transcription factor A-2e OS=Oryza sat... [more]
HSFA2_ARATH1.354e-2950.39Heat stress transcription factor A-2 OS=Arabidopsi... [more]
HFA6B_ARATH2.309e-2949.28Heat stress transcription factor A-6b OS=Arabidops... [more]
HSF30_SOLPE3.015e-2951.15Heat shock factor protein HSF30 OS=Solanum peruvia... [more]
HFA2C_ORYSJ5.144e-2949.62Heat stress transcription factor A-2c OS=Oryza sat... [more]
HSFA3_ARATH8.774e-2946.32Heat stress transcription factor A-3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04L03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04L03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833990 ID=CF833990; Name=CF833990; organism=Citrus sinensis; type=EST; length=604bp
GAGAACAGCCCCTAAACTTTTTTTTTTTTTTTTAACCTCTCAATATCATC
CCTGAGACCCTGTCTTTCTGATTCAGTTAATGGAGTTCCTTGTCCATGTA
GATTCTGATTAGAATGGCTATGAACTGGCTTTCGTCTATGGATGTTCTTC
AAACGTTCAGGCTGACCTCTCACAAAATCTTCATTTGCAAATTCCCATTG
TTCAGGATCAACTTTTCTAAAACCATATGTGTTGAGCTGTCTGATGAAGC
TTGAGAAGTTATTGTGCTTAAAGTATTTTGGTAACAAATCCCTAGCAAAA
TCTGGTGGATTCCACACAATAAAGCTCTTATTACTTGAACTCCAGGACAC
AGTCAAATCTGTCGAAGAATCATCTACCATCTCATATGTTTTTGCAAGAA
AGGGAGGAAGTGAATTTGAACTACCTTGGCCGTCATCCATCACAAACTAA
AGGATCCAATCACGCAGTCCCCAAACTCAATACCCAAAACTAAACCATAA
ACCAGTGCAAAATCCTATTTCCAGGGAAAGTCAAACACTTAATTTTCTTC
AATACCGCAACAGAATCTAAGCTGGAAAGCTCAAACTTCTGATTATTAGT
AAGC
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