CF834003

Overview
NameCF834003
Unique NameCF834003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.303e-34
Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVPKGDAIFMKWI HDW+DEHC+K LKNC  ++P++GKVI+ E +LPE P+T + +K+  H DV+M+ H PGGKERT  EF  LA  AGF   +      N W+ME  K
Sbjct:  244 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.792e-34
Identity = 68/118 (57.63%), Postives = 82/118 (69.49%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVPK DA+FMKWI HDW+D HCLK LKNC  ++PE+GKVI+VE +LP  P+TS+ +K   H DV+M+ H PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  246 EHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.952e-34
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            KH  GDMF SVPKGDAIFMKWI HDW+D+HC K LKNC  ++P  GKVIV E +LP  P+TS+ +K+  H D +M+ H PGGKERT+ EF TLA GAGF G           VMEF K
Sbjct:  247 KHVGGDMFVSVPKGDAIFMKWICHDWSDDHCAKFLKNCYDALPNIGKVIVAECVLPVYPDTSLATKNVIHIDCIMLAHNPGGKERTQKEFETLAKGAGFQGFQVMCCAFGTHVMEFLK 364          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.468e-34
Identity = 63/102 (61.76%), Postives = 78/102 (76.47%), Query Frame = -2
Query:   95 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGM 400
            +H  GDMF SVPKGDAIFMKWI HDW+DEHC+K LKNC +S+PEDGKVI+ E +LPE P++S+ +K   H D +M+ H PGGKERT  EF  LA  +GF G+
Sbjct:  244 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGI 345          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.103e-33
Identity = 67/114 (58.77%), Postives = 81/114 (71.05%), Query Frame = -2
Query:   47 GDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 388
            GDMF SVPK DA+FMKWI HDW+DEHCL  LKNC  ++PE+GKVI+VE +LP  P+TS+ +K   H DV+M+ H PGGKERT  EF +LA GAGF G        N  V+EF K
Sbjct:  249 GDMFVSVPKADAVFMKWICHDWSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.103e-33
Identity = 67/118 (56.78%), Postives = 81/118 (68.64%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVP  DA+FMKWI HDW+D HCLK LKNC  ++PE+GKVI+VE +LP  P+TS+ +K   H DV+M+ H PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  246 EHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.441e-33
Identity = 67/114 (58.77%), Postives = 81/114 (71.05%), Query Frame = -2
Query:   47 GDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 388
            GDMF SVPK DA+FMKWI HDW+DEHCL+LLKNC  ++PE+GKVI+VE +LP  P+TS+ +K   H D +M+ H PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  249 GDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.441e-33
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVPKGDAIFMKWI HDW+D HC+K LK C +++PE+GKVI+ E +LPE P+T + +K+  H DV+M+ H PGGKERT  EF  LA  +GF   +      N W+ME  K
Sbjct:  244 EHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGFKQFNKVCCAYNSWIMELLK 361          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.458e-33
Identity = 65/114 (57.02%), Postives = 82/114 (71.93%), Query Frame = -2
Query:   47 GDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 388
            GDMF SVPK DAIFMKWI HDW+D+HC+KLLKNC +++P +GKVI+VE +LPE P+TS  +KS  H D++M+ H PGGKERT  +F  LA    FS         + WVMEF+K
Sbjct:  246 GDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 5.476e-33
Identity = 67/118 (56.78%), Postives = 80/118 (67.80%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF  VPKGDAIF+KWI HDW+DEHCLKLLKNC  ++P+ GKVIV E +LP  P+ SI +K   H D LM+ + PGGKERT  EF  LA  +GF G        N +VMEF K
Sbjct:  249 EHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366          
The following BLAST results are available for this feature:
BLAST of CF834003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
COMT1_OCIBA1.303e-3455.93Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_POPTM3.792e-3457.63Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_EUCGU4.952e-3458.47Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
OMT1_ARATH6.468e-3461.76Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT2_POPTM1.103e-3358.77Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_POPKI1.103e-3356.78Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT3_POPKI1.441e-3358.77Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_OCIBA1.441e-3354.24Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CAPCH2.458e-3357.02Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
IEMT_CLABR5.476e-3356.78(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04L15_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834003 ID=CF834003; Name=CF834003; organism=Citrus sinensis; type=EST; length=584bp
TTTACCAGATTTGCTTTATTTCTAGGACGCATGGCCAAGCACTCTACTTA
TCGAATTCCATAACCCAGAAATTACCAATAGCACGTTCACAACTCATCCC
ACTAAAACCAGCGCCAGTAGCCAGGGTCATGAATTCATGCCTTGTTCTCT
CCTTTCCACCGGGACAATGAATCATCATAAGCACGTCAAAATGGGAATTT
GATTTTGATTCAATGCTTGTATTAGGAACTTCTGGAAGCATTGACTCCAC
AACGATTACCTTTCCATCTTCCGGAATGCTTTTGCAGCAATTCTTCAACA
ACTTCAAGCAATGTTCATCATTCCAATCGTGCAGTATCCACTTCATAAAA
ATGGCATCACCTTTTGGAACACTTTGGAACATATCACCTTTGGTGTGTTT
GGATTGATTTGGGCTCTCTATTTTATTTACACTGGCGATCTTGAAGAAGA
TGAAGAGTCTGGCTTGTCCCTTTGAATTAAGGGTTATTTAAACTTAGGCT
TGTTGAATTTATTAATGCCCTCTTGTTAAAGAACTGGAAAACCTTTAAAT
CAACCAAAGAAAAGCTTTTGGCTCTTGAAAAAAA
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