CF834003

Overview
NameCF834003
Unique NameCF834003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.054e-32
Identity = 64/118 (54.24%), Postives = 78/118 (66.10%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVP GDAI MKWILHDW+D HC  LLKNC  ++PE+GKVIVVE +LP     + +++   H D++M+ H PGGKER   EF  LA GAGFSG        N W +EF K
Sbjct:  247 RHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31
Identity = 63/119 (52.94%), Postives = 79/119 (66.39%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKG-DAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVP+G DAI MKWILHDW+DEHC +LLKNC  ++PE GKV+VVE +LPE  + +   +   H D++M+ H PGGKER   EF  LA  AGF+G        N W +EF K
Sbjct:  250 EHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31
Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF+SVP GDAI MKWILHDW+D HC  LLKNC  ++PE+GKVI+VE +LP       +++   H D++M+ H PGG+ER   EF  LA GAGFSG        N W +EF K
Sbjct:  245 QHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27
Identity = 53/118 (44.92%), Postives = 80/118 (67.80%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  G+MF+S+P+ DAIFMKW+LHDW+DEHC+K+L  C +S+ + GK+I+VES++P +P  ++ES      D   ++H  GGKER++ +F  LA+  GFS +       + WVME  K
Sbjct:  247 EHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.202e-25
Identity = 48/86 (55.81%), Postives = 63/86 (73.26%), Query Frame = -2
Query:  143 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 400
            +H  GDMF ++P GDA+FMKWI HDW+DEHC KLLKNC  ++P +G+VIV E +LP  P+ S+ +K   H D +M+ H  GGKERT
Sbjct:  228 EHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.557e-24
Identity = 56/118 (47.46%), Postives = 74/118 (62.71%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF+ VP    I +KW+LHDW+D+  +K+LKNC K++PE+G VIV+E +LP+V   + ES +    D+LMM   PGGKERT  EF  LA  AGF+            VMEF K
Sbjct:  261 EHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.306e-23
Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFS--GMSCERAIGNFWVMEFDK 400
            +H  GDMF SVP+GDA+ +K + H+W+DE C++ L NC K++  +GKVI+VE +LPE PNTS ESK  S  D LM I   GG+ERT  ++  L+  +GFS   ++C RA  +  VMEF K
Sbjct:  255 EHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVAC-RAFNSLGVMEFYK 372          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.225e-16
Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = -2
Query:   74 IESPNQSKHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIG 421
            +ES ++  +  GDMFQS+P  DAI +K+I+HDW+DE  LK+LK C  ++   GKVI+++ ++    +     +   HFD+ MM +    KERT +E+  L + AGF+      A G
Sbjct:  233 LESTDKLSYIGGDMFQSIPSADAILLKFIIHDWDDEEGLKILKRCKDAVGIGGKVIIIDVVVGVNHDVDEVLEDQLHFDMAMMSYF-NAKERTMNEWEKLISAAGFTSYKLTPAFG 347          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16
Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -2
Query:   98 NKIESPNQSKHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPED-GKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSG 427
            N  + PN  +   GDMF+SVP   AI +K ILHDWNDE  +K+LK C  ++P+D GKVI+V+  L E  +  + S +    D+ M+++  GGKERT+  +  +   AGFSG
Sbjct:  226 NSYDLPNIER-IGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDHEL-SSTRLILDIDMLVN-TGGKERTKEVWEKIVKSAGFSG 333          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.037e-15
Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = -2
Query:   98 GDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIP-EDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSG 388
            GDMF+ +PK DAI MK ILHDW+D+ C+++LK C +++P + GKVI+V+ +L  V +    +K     D+ MM++  GGKERT  E+  L   AG+ G
Sbjct:  234 GDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMMLN-TGGKERTEEEWKKLIHDAGYKG 329          
The following BLAST results are available for this feature:
BLAST of CF834003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
COMT1_MAIZE6.054e-3254.24Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ1.033e-3152.94Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF3.924e-3152.54Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IMT1_MESCR1.543e-2744.92Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_EUCGL4.202e-2555.81Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
SMT_COPJA3.557e-2447.46(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA2.306e-2349.17Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
CVMT1_OCIBA1.225e-1637.93Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
4OMT_COPJA1.601e-1643.243'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA1.037e-1544.90(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04L15_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834003 ID=CF834003; Name=CF834003; organism=Citrus sinensis; type=EST; length=584bp
TTTACCAGATTTGCTTTATTTCTAGGACGCATGGCCAAGCACTCTACTTA
TCGAATTCCATAACCCAGAAATTACCAATAGCACGTTCACAACTCATCCC
ACTAAAACCAGCGCCAGTAGCCAGGGTCATGAATTCATGCCTTGTTCTCT
CCTTTCCACCGGGACAATGAATCATCATAAGCACGTCAAAATGGGAATTT
GATTTTGATTCAATGCTTGTATTAGGAACTTCTGGAAGCATTGACTCCAC
AACGATTACCTTTCCATCTTCCGGAATGCTTTTGCAGCAATTCTTCAACA
ACTTCAAGCAATGTTCATCATTCCAATCGTGCAGTATCCACTTCATAAAA
ATGGCATCACCTTTTGGAACACTTTGGAACATATCACCTTTGGTGTGTTT
GGATTGATTTGGGCTCTCTATTTTATTTACACTGGCGATCTTGAAGAAGA
TGAAGAGTCTGGCTTGTCCCTTTGAATTAAGGGTTATTTAAACTTAGGCT
TGTTGAATTTATTAATGCCCTCTTGTTAAAGAACTGGAAAACCTTTAAAT
CAACCAAAGAAAAGCTTTTGGCTCTTGAAAAAAA
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