CF834004

Overview
NameCF834004
Unique NameCF834004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834004 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.346e-15
Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 2
Query:  143 IESPNQSKHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFY 514
            +ES +   +  GDMFQS+P  DAI +K I+HDW+D   LK+LK C  ++   GKVI+++ ++    +     +   HFD+ MM +    KERT  E+  L   AGF       A G   ++E Y
Sbjct:  234 LESTDNLNYIGGDMFQSIPSADAILLKSIIHDWDDVEGLKILKKCKDAVVMGGKVIIIDVVVGVNHDIDEVLEDQLHFDMAMMCYF-NAKERTMSEWEKLIYDAGFKSYKLTPAFGVRSLIEAY 356          
BLAST of CF834004 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.346e-15
Identity = 43/140 (30.71%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  104 RLFIFFKIASVNKIESPNQSKHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPED---GKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFY 514
            +  +F +   V  +   N   +  GDMF S+P  DA+ +K+ILH+W D+ CL++LK C +++  D   GKV +++ ++ E  + +  ++     DV M   C  GKER   E+  L   AGF         G   ++E Y
Sbjct:  214 KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDVNMA--CLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351          
BLAST of CF834004 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.288e-15
Identity = 43/140 (30.71%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  104 RLFIFFKIASVNKIESPNQSKHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPED---GKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFY 514
            +  +F +   V  +   N   +  GDMF S+P  DA+ +K+ILH+W D+ CL++LK C +++  D   GKV +++ ++ E  + +  ++     DV M   C  GKER   E+  L   AGF         G   ++E Y
Sbjct:  214 KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVINEKKDENQVTQIKLLMDVNMA--CLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351          
BLAST of CF834004 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.846e-14
Identity = 42/140 (30.00%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  104 RLFIFFKIASVNKIESPNQSKHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPED---GKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFY 514
            +  +F +   V  +   N   +  GDMF S+P  DA+ +K+ILH+W D+ CL++LK C +++  D   GKV +++ ++ +  + +  ++     DV M   C  GKER   E+  L   AGF         G   ++E Y
Sbjct:  214 KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMA--CLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351          
BLAST of CF834004 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.411e-14
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  176 GDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIP---EDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFY 514
            GDMF+S+P  DA+ +K +LHDW+ + C+K+LKNC K+IP     GKVI++  ++   P+     +  + FDV +M     G ER   E+  + + AG+S       +G   ++E Y
Sbjct:  250 GDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMF--INGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVY 363          
BLAST of CF834004 vs. ExPASy Swiss-Prot
Match: OMT4_DICDI (O-methyltransferase 4 OS=Dictyostelium discoideum GN=omt4 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 2
Query:  164 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGF 460
            +H  G+ F+SVP+GD   +K ILHDW DE C+K+L+   KSI   GKVI+ + ++    N    +K + + DV MM H  G +E+T  +F  ++  AGF
Sbjct:  225 EHKSGNFFESVPEGDCYILKRILHDWKDEDCIKILETIGKSILPGGKVIIFDCII----NPKNYNKGHLYLDV-MMFHFFGSEEKTIKQFSNISDKAGF 318          
BLAST of CF834004 vs. ExPASy Swiss-Prot
Match: OMT12_DICDI (O-methyltransferase 12 OS=Dictyostelium discoideum GN=omt12 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.576e-12
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 2
Query:  134 VNKIESPNQS------KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAI 487
            +N   S N++      KH  GD F SVP+ D   +K+ILHDW+DE C+ +L N  KS+  +GK+ + + +L    + S  +K     D+LMM +    KER+ +E+  L    GF   S + +I
Sbjct:  209 INSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVL----DPSNYTKEAVFKDILMMQYF-DAKERSINEWHQLFEKCGFKIDSVDTSI 327          
The following BLAST results are available for this feature:
BLAST of CF834004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
EOMT1_OCIBA6.346e-1536.29Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
7OMT6_MEDSA6.346e-1530.71Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
7OMT9_MEDSA8.288e-1530.71Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA1.846e-1430.00Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
ZRP4_MAIZE2.411e-1435.34O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
OMT4_DICDI5.372e-1440.40O-methyltransferase 4 OS=Dictyostelium discoideum ... [more]
OMT12_DICDI8.576e-1234.68O-methyltransferase 12 OS=Dictyostelium discoideum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834004 ID=CF834004; Name=CF834004; organism=Citrus sinensis; type=EST; length=565bp
TTTTCTTTGGTTGATTTAAAGGTTTTCCAGTCCTTTAACAAGAGGGCATT
AATAAATTCAACAAGCCTAAGTTTAAATAACCCTTAATTCAAAGGGACAA
GCCAGACTCTTCATCTTCTTCAAGATCGCCAGTGTAAATAAAATAGAGAG
CCCAAATCAATCCAAACACACCAAAGGTGATATGTTCCAAAGTGTTCCAA
AAGGTGATGCCATTTTTATGAAGTGGATACTGCACGATTGGAATGATGAA
CATTGCTTGAAGTTGTTGAAGAATTGCTGCAAAAGCATTCCGGAAGATGG
AAAGGTAATCGTTGTGGAGTCAATGCTTCCAGAAGTTCCTAATACAAGCA
TTGAATCAAAATCAAATTCCCATTTTGACGTGCTTATGATGATTCATTGT
CCCGGTGGAAAGGAGAGAACAAGGCATGAATTCATGACCCTGGCTACTGG
CGCTGGTTTTAGTGGGATGAGTTGTGAACGTGCTATTGGTAATTTCTGGG
TTATGGAGTTCTATAAGTAGAGTGCTTGGCCATGCGTCCTAGAAATAAAG
CAAATCTTGTGTTAA
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