CF834006

Overview
NameCF834006
Unique NameCF834006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length329
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.046e-15
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  133 IFFEITTVNKIESPNQS--THTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            I FE+  V + ++P+ S   H  GDMF  VPKGDAIFMKWI HDW+D+HC K LKNC +++P++GKV
Sbjct:  215 INFELPHVVE-DAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKV 280          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.591e-15
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIF+KWI HDW+DEHCLK LKNC  ++P+ GKV
Sbjct:  250 HLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKV 296          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.468e-14
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+D HC+K LK C +++PE+GKV
Sbjct:  245 HVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKV 291          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.468e-14
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPK DA+FMKWI HDW+D HCLK LKNC  ++PE+GKV
Sbjct:  247 HVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKV 293          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.272e-14
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1
Query:  196 GDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            GDMF  VPK DA+FMKWI HDW+DEHCL+ LKNC  ++PE+GKV
Sbjct:  249 GDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENGKV 292          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.272e-14
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+D+HC K LKNC  ++P  GKV
Sbjct:  248 HVGGDMFVSVPKGDAIFMKWICHDWSDDHCAKFLKNCYDALPNIGKV 294          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.579e-14
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VP  DA+FMKWI HDW+D HCLK LKNC  ++PE+GKV
Sbjct:  247 HVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKV 293          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.579e-14
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H   DMF  VPK DAIFMKWI HDW+DEHCLK LKNC +++P +GKV
Sbjct:  243 HVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKV 289          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.287e-14
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 1
Query:  196 GDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            GDMF  VPK DA+FMKWI HDW+DEHCL  LKNC  ++PE+GKV
Sbjct:  249 GDMFVSVPKADAVFMKWICHDWSDEHCLTFLKNCYDALPENGKV 292          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.623e-13
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF+ VP GDAI MKWILHDW+D HC   LKNC  ++PE+GKV
Sbjct:  246 HVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKV 292          
The following BLAST results are available for this feature:
BLAST of CF834006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
COMT1_COFCA5.046e-1556.72Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
IEMT_CLABR6.591e-1570.21(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT2_OCIBA1.468e-1468.09Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_POPTM1.468e-1468.09Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT3_POPKI4.272e-1470.45Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_EUCGU4.272e-1468.09Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_POPKI5.579e-1465.96Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CAPAN5.579e-1468.09Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT2_POPTM7.287e-1470.45Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_SACOF1.623e-1365.96Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04L16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834006 ID=CF834006; Name=CF834006; organism=Citrus sinensis; type=EST; length=329bp
TTTTTTTCAGACCTTAAAGCTTTTCTTTGGATGATTTAAAGGTTTTCCAG
GTCTTTAACAAGAGGGCATTAATAAATTCAACTAGCCTAAGTTTAAATAA
CCCTTAATTCAAAGGGACAAGCCAGACTCTTCATCTTCTTCGAGATCACC
ACTGTAAATAAAATAGAGAGCCCAAATCAATCCACACACACCAAAGGTGA
TATGTTCCAAAGGGTTCCAAAAGGTGATGCCATTTTTATGAAGTGGATAC
TGCACGATTGGAATGATGAACATTGCTTGAAGGGGCTGAAGAATTGCTGC
AAAAGCATTCCGGAAGATGGAAAGGTAAT
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