CF834033

Overview
NameCF834033
Unique NameCF834033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9802 contig Csv1_Contig9802:380..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.558e-56
Identity = 101/191 (52.88%), Postives = 127/191 (66.49%), Query Frame = -1
Query:  197 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLP----GQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMA 757
            F  QT HETTGGW  AP G Y+WGYC+  ++  G+           P     +Y+GRGPIQL++N NY   GE +G DLLNNP L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI  +W PS+ D+ A R+PGYG+  NII GG+ECG G +  VA RIGF+  +C   GI  G NLDCY Q P+   L A
Sbjct:  144 FLGQTSHETTGGWATAPDGPYSWGYCFKEEI--GATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.871e-56
Identity = 103/192 (53.65%), Postives = 128/192 (66.67%), Query Frame = -1
Query:  188 FFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM 757
            F AQT HETTGGW  AP G YAWGYCY+R Q S G+            G+ YYGRGPIQ+++N NY + G+ +GVDL+NNP L+ATD V+SFK+A WFWMT Q PKPSCH VI   W PS  D +A RLPG+G+  NII GG+ECGKG    V  RIGF+  +C    +  G+NLDC  Q P+G  L+  ++
Sbjct:  123 FLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.431e-54
Identity = 102/183 (55.74%), Postives = 124/183 (67.76%), Query Frame = -1
Query:  215 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPY 757
            F AQT HETTGGW  AP G +AWGYC+ ++    +D        P  PG+ YYGRGPIQL+ N NY   G  +GVDLL NP L+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W+PS  D  A R PG+G+  NII GG+ECG G +S VA RIGF+  +C   G+  GDNLDCY Q P+
Sbjct:   83 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.431e-54
Identity = 103/183 (56.28%), Postives = 125/183 (68.31%), Query Frame = -1
Query:  215 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPY 757
            F AQT HETTGGW  AP G +AWGYC+ ++    SD        P  PG+ YYGRGPIQL+ N NY   G  +GVDLL NP L+ATD  + FK+AIWFWMTAQPPKPS H VI  +W+PS  D  A R+PG+G+  NII GGIECG G +S VA RIGF+  +C   G+  G+NLDCY+Q P+
Sbjct:   83 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.417e-54
Identity = 98/179 (54.75%), Postives = 120/179 (67.04%), Query Frame = -1
Query:  224 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQ 757
            F AQT HETTGGWP AP G YAWGYC++ + +              PG+ YYGRGPIQLT N NY   G+ +  DL+NNP LL+T+P +SFK+AIWFWMT Q  KPS H+VI   W PSA D +A R+PGYG+  NII GGIECG G ++ V  R+GF+  +C  FG+ PG NLDC  Q
Sbjct:  138 FLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQ 316          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 211.075 bits (536), Expect = 5.417e-54
Identity = 101/183 (55.19%), Postives = 126/183 (68.85%), Query Frame = -1
Query:  215 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPY 757
            F AQT HETTGGW  AP G +AWGYC+ ++    S+        P  PG+ YYGRGPIQL+ N NY   G  +GVDLL NP L+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W+PS  D  A R+PG+G+  NI+ GGIECG G +S VA RIGF+  +C   G+  G+NLDCY+Q P+
Sbjct:  135 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.074e-54
Identity = 98/184 (53.26%), Postives = 123/184 (66.85%), Query Frame = -1
Query:  212 FFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYG 757
            F AQT HETTGGW  AP G Y+WGYCY R Q S G            PG+ Y+GRGPIQ+++N NY   G  +GV+LLNNP L+A D V+SFK+A+WFWMTAQ PKPS H+VI   W+PS  D    R+PG+G+  NII GG+EC  G N+ +  RIGF+  +C   G+ PG+NLDC  Q P+G
Sbjct:   63 FLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.239e-54
Identity = 100/183 (54.64%), Postives = 123/183 (67.21%), Query Frame = -1
Query:  215 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPY 757
            F  QT HETTGGWP AP G ++WGYC+ ++ +  SD        P  PG+ YYGRGPIQL++N NY   G  +GVDLL+NP L+ATD  +SFK+A+WFWMT Q  KPS H+VI   W PS  D  A R PGYG+  NI+ GG+ECG G +  VA RIGF+  +CG FGI  G NLDCY Q P+
Sbjct:  147 FLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.576e-53
Identity = 94/183 (51.37%), Postives = 125/183 (68.31%), Query Frame = -1
Query:  212 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVA-TRIGFFPTFCGKFGIQPGDNLDCYTQGPYG 757
            FF QT HETTGGW  AP G +AWGYC + +++                 YYGRGPIQLT   NY   G+ LG+DL+NNP L+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++ RLPGYG+  NII GG ECGKG+++  A  R+G++  +C  F +  GDN+ C  Q PYG
Sbjct:   84 FFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDPP------------YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.989e-53
Identity = 100/183 (54.64%), Postives = 124/183 (67.76%), Query Frame = -1
Query:  215 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPY 757
            F AQT HETTGGW  AP G +AWGYC+ ++    S+        P  PG+ YYGRGPIQL+ N NY   G  +GVDLL NP L+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W+PS  D  A R+PG+G+  NI+ GGIECG G +S VA RIGF+  +C    +  G+NLDCY Q P+
Sbjct:  138 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320          
The following BLAST results are available for this feature:
BLAST of CF834033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI9_ORYSJ7.558e-5652.88Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_VITVI9.871e-5653.65Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHIC_SECCE2.431e-5455.74Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHI2_HORVU2.431e-5456.2826 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHIX_PEA5.417e-5454.75Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI1_HORVU5.417e-5455.1926 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHID_SOLLC7.074e-5453.26Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI2_ORYSJ9.239e-5454.64Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI11_ORYSJ1.576e-5351.37Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIA_SECCE5.989e-5354.64Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834033 ID=CF834033; Name=CF834033; organism=Citrus sinensis; type=EST; length=757bp
TTTTTTTTTTTTTTTTTGGAGAAGACTCATTGCCTTTTTGGTTGGATCAG
GTCTTATTTAATTTACCTACAATAAGCAGCGTAACAAACTAACAATTTAG
TTGTCCACCTACAAGGGGGACATCTAAAGTTTTTATTAAGTAGCTTTTAT
TAAGCTTATTTTACTAAAACGTTGATCATGATGATCACATAGATTGGGCC
ATCAAATTAGGGCCATAAGGGCCTTGGGTGTAGCAATCAAGATTGTCGCC
AGGCTGAATCCCAAACTTGCCACAGAAAGTGGGAAAGAACCCAATACGGG
TAGCTACAAAGCTATTCCAACCTTTGCCACATTCAATTCCACCGGTGATT
ATATTTGGGGGTAGACCGTATCCCGGAAGCCGGCTGGCGTTTACGTCATT
TGCTGATGGGTTCCATTCGTCGATAATGACTTCGTGGCACGATGGCTTTG
GTGGCTGTGCAGTCATCCAGAACCAGATTGCTGACTTGAATGATAGTACT
GGATCAGTGGCAAGAAGGGCTGGATTGTTCAACAAGTCCACCCCCAAGGG
TTCTCCGCACCTTAAGTAATTGCAATTCCAAGTGAGTTGAATTGGACCTC
GGCCATAGTATTGCCCTGGCAAGGGACATGGACAGTAAGGATAACAGTAG
TCGGACCCATGGCTAACTTGCCTAATATAGCAATATCCCCAAGCATATTC
TCCACCAGGGGCATCGGGCCATCCCCCAGTAGTTTCATGGCCAGTTTGGG
CAAAAAA
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