CF834033

Overview
NameCF834033
Unique NameCF834033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.334e-52
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = -1
Query:  215 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSH--GSDXXXXXXXXPLPG--QYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPY 757
            F AQT HETTGGW  AP G Y+WGYC+  + +   GSD        P     +YYGRGPIQ+++N NY   G+ +G +LL+NP L+A+D  +SFK+A WFWMT Q PKPSCH V+  +W P+ ND  A R+PGYG+  NII GG+ECG G +S VA RIGF+  +C   G+  G NLDCY Q P+
Sbjct:  137 FLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.475e-51
Identity = 94/186 (50.54%), Postives = 118/186 (63.44%), Query Frame = -1
Query:  212 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLP----GQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYG 757
            F AQT HETTGGW  AP G YAWGYC+  +    +           P     +YYGRGPIQL++N NY   G+ +G DLL +P L+A+D  +SF +A WFWMT Q PKPSCH V   +W PSA+D  A R+PGYG+  NII GG+ECG G +  VA RIGF+  +C   G+    NLDCY+Q P+G
Sbjct:  140 FLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.803e-49
Identity = 96/178 (53.93%), Postives = 117/178 (65.73%), Query Frame = -1
Query:  224 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQ 757
            FF QT HETTGG   A G  +A GYC++R+ +             +   +YGRGPIQLT   NY   G+ +G DL+NNP L+ATD  +SFK+AIWFWMTAQ  KPSCH+VI  +W PSA D +A+R PGYG+  NII GGIECGKG N  V  RIGF+  +C    + PGDNLDCY Q
Sbjct:   77 FFGQTSHETTGGSLSADG-PFAGGYCFVREGNQ------------MGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQ 241          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.604e-48
Identity = 92/180 (51.11%), Postives = 116/180 (64.44%), Query Frame = -1
Query:  224 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGV--DLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQ 757
            FF QT HET GG      G +  GYC++RQ+                 +YYGRGPIQLT   NY R G+ +GV  DL+NNP L+ATDP++SF++AIWFWMTAQ  KPSCH VII +W PS  D  A+R+PGYG+  NII GG+EC  G N+ V +RIGF+  +CG   +  G+NLDC  Q
Sbjct:   85 FFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQ 247          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.894e-48
Identity = 94/178 (52.81%), Postives = 115/178 (64.61%), Query Frame = -1
Query:  224 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQ 757
            FF QT HETTGG   +P G YA GYC++R+ +             +   YYGRGPIQLT   NY   G+ +  DL+NNP L+ATD  +SFK+AIWFWMT Q  KPSCH+VI   W PSA D +A+R+PGYG+  NII GGIECGKG N+ V  RIG++        + PGDNLDCY Q
Sbjct:   84 FFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQ------------MGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQ 248          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.879e-47
Identity = 93/182 (51.10%), Postives = 114/182 (62.64%), Query Frame = -1
Query:  212 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYG 757
            FF QT HETTGG   A    +  GYC++RQ                  +YYGRGPIQLT   NY + G  +G +L+NNP L+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D  A+R+PGYG+  NII GGIECG G N  V  RIG++  +CG   + PG+NLDCY Q  +G
Sbjct:   85 FFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.760e-47
Identity = 90/178 (50.56%), Postives = 111/178 (62.36%), Query Frame = -1
Query:  224 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQ 757
            FF QT HETTGG   +   ++ WGYC+  +++  +              YYGRGPIQLT   NY   G  LG+DL+ NP L++TD V+SFK+AIWFWMTAQ  KPSCH+VI+  W PSA D  A R+PGYG+  NII GGIECG G N     RIG++  +C   G   G NLDCY Q
Sbjct:   91 FFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-----------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQ 256          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.094e-46
Identity = 89/180 (49.44%), Postives = 113/180 (62.78%), Query Frame = -1
Query:  224 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGV--DLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQ 757
            FF QT HET GG      G +  GYC+++Q+                 +YYGRGPIQLT   NY R G+ +GV  +L+NNP L+ATDP++SFK+AIWFWMT Q  KPSCH VII +W PS  D  A+R+PGYG+  NII G  ECG G N+   +RIGF+  +CG   +  G+NLDC  Q
Sbjct:   85 FFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQ 247          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.429e-46
Identity = 92/178 (51.69%), Postives = 111/178 (62.36%), Query Frame = -1
Query:  224 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQ 757
            FF QT HETTGG   A    +  GYC++RQ                  +YYGRGPIQLT   NY + G  +  DL+NNP L+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D +A+R PG G+  NII GGIECG G N+ V  RIG++  +CG   + PGDNLDCY Q
Sbjct:   85 FFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQ 247          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.746e-44
Identity = 83/184 (45.11%), Postives = 114/184 (61.96%), Query Frame = -1
Query:  215 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPY 757
            F AQ  HETTGGW  AP G YAWG CY  +++  S             PG+ Y+GRGPIQ++WN NY   G+ LG D L NP ++A    ++F++A+WFWMT +  KPSCH+V++ E+ P   DV A+R  G+GL  NI+ GG+EC +  ++ V  RIGF+  +C   G+  G NLDC  Q P+
Sbjct:  107 FLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290          
The following BLAST results are available for this feature:
BLAST of CF834033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI1_ORYSJ1.334e-5251.89Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI12_ORYSJ1.475e-5150.54Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIB_SOLLC1.803e-4953.93Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIA_SOLCI2.604e-4851.11Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHIT_PETHY9.894e-4852.81Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHIQ_TOBAC2.879e-4751.10Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHI8_ORYSJ3.760e-4750.56Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIA_SOLLC1.094e-4649.44Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIP_TOBAC5.429e-4651.69Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHI10_ORYSJ1.746e-4445.11Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834033 ID=CF834033; Name=CF834033; organism=Citrus sinensis; type=EST; length=757bp
TTTTTTTTTTTTTTTTTGGAGAAGACTCATTGCCTTTTTGGTTGGATCAG
GTCTTATTTAATTTACCTACAATAAGCAGCGTAACAAACTAACAATTTAG
TTGTCCACCTACAAGGGGGACATCTAAAGTTTTTATTAAGTAGCTTTTAT
TAAGCTTATTTTACTAAAACGTTGATCATGATGATCACATAGATTGGGCC
ATCAAATTAGGGCCATAAGGGCCTTGGGTGTAGCAATCAAGATTGTCGCC
AGGCTGAATCCCAAACTTGCCACAGAAAGTGGGAAAGAACCCAATACGGG
TAGCTACAAAGCTATTCCAACCTTTGCCACATTCAATTCCACCGGTGATT
ATATTTGGGGGTAGACCGTATCCCGGAAGCCGGCTGGCGTTTACGTCATT
TGCTGATGGGTTCCATTCGTCGATAATGACTTCGTGGCACGATGGCTTTG
GTGGCTGTGCAGTCATCCAGAACCAGATTGCTGACTTGAATGATAGTACT
GGATCAGTGGCAAGAAGGGCTGGATTGTTCAACAAGTCCACCCCCAAGGG
TTCTCCGCACCTTAAGTAATTGCAATTCCAAGTGAGTTGAATTGGACCTC
GGCCATAGTATTGCCCTGGCAAGGGACATGGACAGTAAGGATAACAGTAG
TCGGACCCATGGCTAACTTGCCTAATATAGCAATATCCCCAAGCATATTC
TCCACCAGGGGCATCGGGCCATCCCCCAGTAGTTTCATGGCCAGTTTGGG
CAAAAAA
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