CF834033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.668e-44 Identity = 87/181 (48.07%), Postives = 107/181 (59.12%), Query Frame = -1 Query: 215 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPY 757 F AQT HETTGGWP AP G Y G Y+GRGPIQ+++N NY G+ +GVDLL NP L+ +D + FK+A+WFWMT Q PKPS H+VI W+PS+ D A R+PGYG+ NII GG+ECGKG S VA RIG++ DNLDCY Q P+ Sbjct: 51 FLAQTSHETTGGWPTAPDGPYELGST---------------------SDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 4.302e-43 Identity = 85/187 (45.45%), Postives = 104/187 (55.61%), Query Frame = -1 Query: 200 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGW-NSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLM 757 F QT HET G WP A G +Y WGYC++ N NY CG+ L + LL P L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D A R+PGYG+ NII GGIECG+G N+ RIGF+ T+C G G NLDCY Q P+G L+ Sbjct: 143 FLGQTSHETNGWWPAAQGDQYDWGYCHM--------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.083e-41 Identity = 83/187 (44.39%), Postives = 106/187 (56.68%), Query Frame = -1 Query: 206 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLP--GQYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPN 757 FFAQT ET+G + WGYC + +++ SD P YYGRGP+QL WN NY CG LG +LL+ P +ATDPVLSF++A+WFWM PSCHEVI EW+PS D+ A R PG+G+ NIIT G EC K + RI ++ +C + PGDNL C Q + N Sbjct: 121 FFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETFEDN 307
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.452e-40 Identity = 84/192 (43.75%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 191 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQS 757 F AQT H T+GG Y+WGYCY SD P PG+ Y+ RGP+Q+ +N NY GE +G DLL NP L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D A R PGYGL NI+TGG++C G A R+ F+ +C G+ G NLDC+ Q P+ ++M+ S Sbjct: 155 FLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.814e-40 Identity = 84/192 (43.75%), Postives = 113/192 (58.85%), Query Frame = -1 Query: 191 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQS 757 F AQT H T+GG Y+WGYCY SD P PG+ Y+ RGP+Q+ +N NY GE +G DLL NP L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D A R PGYGL NI+TGG++C G A R+ F+ +C G+ G NLDC+ Q P+ +M+ S Sbjct: 155 FLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22 Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = -1 Query: 239 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVS-HGSDXXXXXXXXPLPGQYYG-RGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFV--ATRIGFFPTFCGKFGIQPGDNL 757 F A T+G D +AWG C+I + +D G+ Y RGPIQLT N NY G+ +G DL+ NP L+ DP++SFK+A+WFWM+ KPSCH++++ +AN A+R+P G+ NII+ G + F ++ IGF+ +C G+ G +L Sbjct: 186 FLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20 Identity = 58/179 (32.40%), Postives = 81/179 (45.25%), Query Frame = -1 Query: 233 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQ----YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDC 757 FFA HET CYI +++ S P Q YYGRGP+Q++WN NY G+ +G D L +P +A DP +SFK+A+WFWM N+V+ L G+G I G +EC V R+ ++ +C +FG+ PG NL C Sbjct: 144 FFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.297e-20 Identity = 61/177 (34.46%), Postives = 79/177 (44.63%), Query Frame = -1 Query: 233 FFAQTGHETTGGWP-DAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDC 757 FFA HETT + G+ YC D G+ YYGRGP+QL+WN NY G+ +G D L NP +ATD SFK+A+WFWMT +V++ G+G I G +EC RI F+ +C FG+ PGDNL C Sbjct: 142 FFAHISHETTNLCHIEERDGDVGDAYC---------DQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 8.728e-20 Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = -1 Query: 233 QYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDC 613 +Y+GRGP+QL+WN NY+ G+ L D LN+P ++ DP++SFK+++WFW+ + VI+D P+ G+G II GG EC + + R+G++ +C + G+ PG+NL C Sbjct: 141 EYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.944e-19 Identity = 56/179 (31.28%), Postives = 80/179 (44.69%), Query Frame = -1 Query: 233 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQ----YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDC 757 FFA HET CYI +++ + P Q YYGRGP+Q++WN NY G+ +G D L +P +A DP +SFK+A+WFWM N+V+ G+G I G +EC V R+ ++ +C +FG+ PG NL C Sbjct: 141 FFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285 The following BLAST results are available for this feature:
BLAST of CF834033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834033 ID=CF834033; Name=CF834033; organism=Citrus sinensis; type=EST; length=757bpback to top |