CF834042

Overview
NameCF834042
Unique NameCF834042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_CLITE (Chalcone--flavonone isomerase OS=Clitoria ternatea GN=CHI PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.899e-73
Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = -3
Query:  195 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDKMK 785
            S  + FLGGAG RGL+IE KFVKFTAIG+YL ++A+P LA KW GK+  ELTESVEFFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAI+KF +VFKDE FPPGSSILFT S  GSL I+FSKDGS       VIEN LLSEAVLESMIGK+GVSPAAK+SLA R+S L     D  K
Sbjct:   26 SADTFFLGGAGVRGLQIEDKFVKFTAIGIYLHDDALPFLAAKWNGKSDHELTESVEFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIDKFVSVFKDETFPPGSSILFTVSPKGSLGITFSKDGST----TTVIENKLLSEAVLESMIGKHGVSPAAKQSLASRLSGLFKAGGDTDK 219          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.608e-72
Identity = 141/191 (73.82%), Postives = 159/191 (83.25%), Query Frame = -3
Query:  219 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 788
            GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTD E +AIEKF  VF+ E FPPG+SI+FTQS  G LTISF+KD S+     AVIEN  LSEAVLES+IGK+GVSPAAK S+AER++ LL
Sbjct:   25 GSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSPAAKCSVAERVAELL 215          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1_ARATH (Chalcone--flavonone isomerase 1 OS=Arabidopsis thaliana GN=CHI1 PE=2 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 4.678e-72
Identity = 136/196 (69.39%), Postives = 161/196 (82.14%), Query Frame = -3
Query:  201 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 785
            S+   FLGGAG RGL+I+GKFV FT IGVYLE NAVP L+ KWKGKT EELTES+ FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  G+YTD EAKA+EKF  +FK+E FPPGSSILF  S +GSLT++FSKD SIP+ G+AVIEN LL+EAVLES+IGKNGVSP  + S+AER+S L+    D+
Sbjct:   35 SSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSKDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSVAERLSQLMMKNKDE 230          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI2_CHRMO (Chalcone--flavonone isomerase 2 OS=Chrysanthemum morifolium GN=CHI2 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 6.110e-72
Identity = 135/197 (68.53%), Postives = 159/197 (80.71%), Query Frame = -3
Query:  201 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 788
            G T + FLGGAG RG+EI+G FVKFT IGVYLE+ A+PLLAGKWKGKTAEEL  SVEFFRD+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   I+KF  VFKDE FPPG+SILFT S  GSLTISFSKDG IP+    V+EN  L++AV+ES+IGKNGVSPA K+SLA R+S L+N   +K
Sbjct:   25 GDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSPATKQSLASRLSDLMNHFDEK 221          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_TOBAC (Chalcone--flavonone isomerase OS=Nicotiana tabacum GN=CHI PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.042e-71
Identity = 138/190 (72.63%), Postives = 159/190 (83.68%), Query Frame = -3
Query:  222 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 788
            GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWK K++EEL  S++FFRD+VTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTDAE++AIEK   +F++E FPPG+SILFTQS  G+LTISF KD SI   G AVIEN  LSEAVLES+IGK+GVSPAAK S+AER+S L
Sbjct:   20 GSTNTFFLAGAGNRGLEIEGKFVKFTAIGVYLEESALPFLAAKWKSKSSEELANSLDFFRDIVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKAIGTYTDAESQAIEKLLNIFQNETFPPGASILFTQSPVGALTISFIKDDSITGTGNAVIENKQLSEAVLESIIGKHGVSPAAKCSIAERVSGL 209          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1_CHRMO (Chalcone--flavonone isomerase 1 OS=Chrysanthemum morifolium GN=CHI1 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.361e-71
Identity = 134/197 (68.02%), Postives = 159/197 (80.71%), Query Frame = -3
Query:  201 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 788
            G T + FLGGAG RG+EI+G FVKFT IGVYLE+ A+PLLAGKWKGKTAEEL  SVEFFRD+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   I+KF  VFKDE FPPG+SILFT S  GSLTISFSKDG IP+    V+EN  L++AV+ES+IGKNGVSPA K+SLA R++ L+N   +K
Sbjct:   25 GDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSPATKQSLASRLADLMNHFDEK 221          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI3_PETHY (Chalcone--flavonone isomerase C OS=Petunia hybrida GN=CHI3 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.778e-71
Identity = 139/191 (72.77%), Postives = 158/191 (82.72%), Query Frame = -3
Query:  219 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 788
            GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VT ILPLTG QYSEKVAENC+A WK  G YTD E +AIEKF  VF+ E FPPG+SI+FTQS  G LTISF+KD S+     AVIEN  LSEAVLES+IGK+GVSPAAK ++AER++ LL
Sbjct:   25 GSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTTILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSPAAKCNVAERVAELL 215          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_ARALP (Chalcone--flavonone isomerase OS=Arabidopsis lyrata subsp. petraea GN=CHI PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.322e-71
Identity = 134/190 (70.53%), Postives = 159/190 (83.68%), Query Frame = -3
Query:  219 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 785
            S+   FLGGAG RGL+I+GKFV FT IGVYLE NAVP L+ KWKGKT EEL+ESV FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  GIYTD EAKA+EKF  +FK+E FPPGSSILF  S +GSLT++FS+D SIP+ G+AVIEN LL+EAVLES+IGKNGVSP  + S+AER++ L+
Sbjct:   33 SSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSLSVKWKGKTTEELSESVPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSRDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSIAERLAKLM 222          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_DIACA (Chalcone--flavonone isomerase OS=Dianthus caryophyllus GN=CHI PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.505e-70
Identity = 135/192 (70.31%), Postives = 162/192 (84.38%), Query Frame = -3
Query:  216 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 788
            GS K+ FLGGAG RGLEI+GKF+KFTAI VY+E++AV  LA KWKGKTA+ELT+SV+FF+D+VTGPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAE++A +KF  VFK+   PPG+SILFTQS  GSLTISFSKDGS+P++G  VI N  LSEAVL+S+IGK+GVSP AKKSL+ R+S L+N
Sbjct:   22 GSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAVKWKGKTADELTDSVDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGTYTDAESEATQKFLQVFKNVSNPPGASILFTQSPLGSLTISFSKDGSLPENGKEVIVNKQLSEAVLQSIIGKHGVSPEAKKSLSARLSDLIN 213          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_ALLCE (Chalcone--flavonone isomerase OS=Allium cepa GN=CHI PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.505e-70
Identity = 130/192 (67.71%), Postives = 157/192 (81.77%), Query Frame = -3
Query:  216 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 788
            GS+K+HFLGGAG RGLEI GKF+ FTAIG+YLE +++P LA KWKGKT EEL  S++FFRD+ TGPFEKF  VTMILPLTG QYSEKV ENC+A WK  GIYTDAEA A++KF   FK E FPPGSSILFT + SG+L I+FSKDGS+ KD   +IEN  L++AVLES+IG++GVSPAAK S+A R+S ++N
Sbjct:   22 GSSKTHFLGGAGVRGLEIGGKFIAFTAIGIYLETDSIPFLADKWKGKTGEELAGSLDFFRDICTGPFEKFTNVTMILPLTGEQYSEKVTENCVAYWKAIGIYTDAEASAVDKFKQAFKPESFPPGSSILFTHTPSGTLKIAFSKDGSVSKDEGVLIENKALTQAVLESIIGEHGVSPAAKLSIASRLSEIMN 213          
The following BLAST results are available for this feature:
BLAST of CF834042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CLITE1.899e-7372.73Chalcone--flavonone isomerase OS=Clitoria ternatea... [more]
CFI1_PETHY1.608e-7273.82Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI1_ARATH4.678e-7269.39Chalcone--flavonone isomerase 1 OS=Arabidopsis tha... [more]
CFI2_CHRMO6.110e-7268.53Chalcone--flavonone isomerase 2 OS=Chrysanthemum m... [more]
CFI_TOBAC1.042e-7172.63Chalcone--flavonone isomerase OS=Nicotiana tabacum... [more]
CFI1_CHRMO1.361e-7168.02Chalcone--flavonone isomerase 1 OS=Chrysanthemum m... [more]
CFI3_PETHY1.778e-7172.77Chalcone--flavonone isomerase C OS=Petunia hybrida... [more]
CFI_ARALP2.322e-7170.53Chalcone--flavonone isomerase OS=Arabidopsis lyrat... [more]
CFI_DIACA1.505e-7070.31Chalcone--flavonone isomerase OS=Dianthus caryophy... [more]
CFI_ALLCE1.505e-7067.71Chalcone--flavonone isomerase OS=Allium cepa GN=CH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834042 ID=CF834042; Name=CF834042; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTGGTCGGGACATCAGCATTCGTAAATTAACCCAT
AATTTGGGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAG
GAAAGGACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACA
ACTCTGCCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCAT
CTTATCACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCT
TCTTTGCTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACT
GCCTCAGAAAGCAGATTATTCTCTATTACCGCAACACCATCTTTCGGTAT
TGAACCGTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGAGTAA
AGAGAATTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTG
AATTTTTCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTT
CCATATGGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAG
TTAATGGCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTG
ACGACGTCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTT
CCCCTTCCATTTGCCGGCGAGTAACGGCACGGCGTTCTCCTCCAAGTACA
CTCCTATCGCCGTGAACTTCACGAACTTCCCTTCAATCTCCAATCCTCTC
TCCCCTGCGCCGCCGAGGAAATGCGACTTTGTTGATCCTG
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