CF834042

Overview
NameCF834042
Unique NameCF834042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.458e-65
Identity = 132/189 (69.84%), Postives = 154/189 (81.48%), Query Frame = -3
Query:  222 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 785
            S  + FL GAG RGL+I   FVKFTAI VYL+ +A+  L+ KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF +VFKD  FPPGSSILFT S +GSLTISFS D +IP+   AVIEN LLSEAVLESMIGKNGVSPAAK+SLA R+S L
Sbjct:   25 SPNTFFLAGAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSHL 213          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.904e-65
Identity = 131/189 (69.31%), Postives = 154/189 (81.48%), Query Frame = -3
Query:  222 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 785
            S  + FL GAG RGL+I   FVKFTAI +YL+ +A+  L+ KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF +VFKD  FPPGSSILFT S +GSLTISFS D +IP+   AVIEN LLSEAVLESMIGKNGVSPAAK+SLA R+S L
Sbjct:   25 SPNTFFLAGAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSHL 213          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_ORYSJ (Chalcone--flavonone isomerase OS=Oryza sativa subsp. japonica GN=CHI PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.771e-63
Identity = 126/198 (63.64%), Postives = 148/198 (74.75%), Query Frame = -3
Query:  207 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGV--AVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 788
            GS  +HFL GAG RG+EI G F+KFTAIGVYLEE A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF   FK   FPPG+SILFT S  G LT++FSKD S+P+  V  A IEN  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:   22 GSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_ORYSI (Chalcone--flavonone isomerase OS=Oryza sativa subsp. indica GN=CHI PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.771e-63
Identity = 126/198 (63.64%), Postives = 148/198 (74.75%), Query Frame = -3
Query:  207 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGV--AVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 788
            GS  +HFL GAG RG+EI G F+KFTAIGVYLEE A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF   FK   FPPG+SILFT S  G LT++FSKD S+P+  V  A IEN  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:   22 GSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.487e-62
Identity = 119/192 (61.98%), Postives = 151/192 (78.65%), Query Frame = -3
Query:  219 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQ--SSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 788
            GS+ S FL GAGERGLEI+ +FV FTAIGVYLE+ AV  L  KWKGKTA++L  + +FFRD+ TGPFEKF ++TM+ PL+G QYSEKV ENC+A WK  G YT+AEA A+EKF    K+E FPPG+SILFT   S  SLTI+F ++GS+P+ G  VIE+  LSEA+LES+IGK+GVSP AK+S+A+R+S +L
Sbjct:   26 GSSSSLFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESIIGKHGVSPGAKRSVAQRLSEIL 217          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.277e-61
Identity = 121/192 (63.02%), Postives = 144/192 (75.00%), Query Frame = -3
Query:  219 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 788
            GS  +HFL GAG RG+EI G F+KFTAIGVYL+ +A V  LA KW GK A +L     FFRDVVTG FEKF +VTMILPLTGAQYS+KV ENC+A WK  G+YTDAEA A++KF   F    F PG+SILFT S +G LT++FSKD S+P+ G   IEN  L EAVLES+IG++GVSPAAK SLA R++ LL
Sbjct:   21 GSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESIIGEHGVSPAAKLSLANRVAELL 212          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1A_SOYBN (Chalcone--flavonone isomerase 1A OS=Glycine max GN=CHI1A PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.944e-58
Identity = 113/191 (59.16%), Postives = 146/191 (76.44%), Query Frame = -3
Query:  216 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 785
            S K++FLGGAGERGL IEGKF+KFT IGVYLE+ AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG+S+ + QS  G L +SFS+D +IP+   AVIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+L+
Sbjct:   23 SGKTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGASVFYRQSPDGILGLSFSEDATIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 213          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_PUELO (Chalcone--flavonone isomerase OS=Pueraria lobata GN=CHI PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.700e-56
Identity = 109/191 (57.07%), Postives = 146/191 (76.44%), Query Frame = -3
Query:  216 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 785
            S +++FLGGAGERGL IEGKF+KFT IGVYLE+ AV  LA KWKGK +EEL E+++F+RD+++GPFEK ++ + ILPL+G +YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG+++ + QS  G L +SFS+D +IP +  AVIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+L+
Sbjct:   29 SGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAAKWKGKPSEELVETLDFYRDIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFQPGATVFYRQSPDGVLGLSFSEDVTIPDNEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 219          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_PHAVU (Chalcone--flavonone isomerase OS=Phaseolus vulgaris GN=CHI PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 109/191 (57.07%), Postives = 143/191 (74.87%), Query Frame = -3
Query:  216 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 785
            + K++FLGGAGERGL IEGKF+KFTAIGVYLE+ AV  LA KWKGK +EEL  +++F+RD+++GPFEK ++ + IL L+G +YS KV ENC+A  K  G Y DAEAK IE+F   FK   FPPG+S+ + QS  G L +SFS+D +IP +   VIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+LN
Sbjct:   26 TAKTYFLGGAGERGLTIEGKFIKFTAIGVYLEDKAVASLATKWKGKPSEELINTLDFYRDIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGTYGDAEAKGIEEFAEAFKKVNFPPGASVFYRQSPDGILGLSFSEDATIPGEEAVVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLN 216          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI2_ARATH (Chalcone--flavonone isomerase 2 OS=Arabidopsis thaliana GN=CHI2 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 120/191 (62.83%), Postives = 139/191 (72.77%), Query Frame = -3
Query:  216 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFT-QSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 785
            S K  FLGGAG        KFV  T IGVYLE  A+P ++ KWKGK A+ELTESV FFR +VTG FEK  +VTM   LTG QYSEKV ENC  I K  G YT +EAKAI++F  VFK++ FPPGSSI+F     GSLTI+FSK+  +PK G AVI+N LL EAVLESMIGKNGVSPA +KSLAER+S L+N
Sbjct:   25 SHKRLFLGGAG--------KFVIVTVIGVYLEAMALPSISAKWKGKNAKELTESVPFFRQLVTGEFEKLARVTMKKRLTGIQYSEKVVENCEEIMKASGKYTRSEAKAIDQFLMVFKNQDFPPGSSIIFAICPKGSLTIAFSKEERVPKTGKAVIKNKLLGEAVLESMIGKNGVSPATRKSLAERLSKLMN 207          
The following BLAST results are available for this feature:
BLAST of CF834042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI3_SOYBN1.458e-6569.84Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI2A_SOYBN1.904e-6569.31Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]
CFI_ORYSJ6.771e-6363.64Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_ORYSI6.771e-6363.64Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_CANGE7.487e-6261.98Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_HORVU8.277e-6163.02Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]
CFI1A_SOYBN2.944e-5859.16Chalcone--flavonone isomerase 1A OS=Glycine max GN... [more]
CFI_PUELO4.700e-5657.07Chalcone--flavonone isomerase OS=Pueraria lobata G... [more]
CFI_PHAVU6.139e-5657.07Chalcone--flavonone isomerase OS=Phaseolus vulgari... [more]
CFI2_ARATH1.368e-5562.83Chalcone--flavonone isomerase 2 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834042 ID=CF834042; Name=CF834042; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTGGTCGGGACATCAGCATTCGTAAATTAACCCAT
AATTTGGGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAG
GAAAGGACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACA
ACTCTGCCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCAT
CTTATCACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCT
TCTTTGCTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACT
GCCTCAGAAAGCAGATTATTCTCTATTACCGCAACACCATCTTTCGGTAT
TGAACCGTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGAGTAA
AGAGAATTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTG
AATTTTTCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTT
CCATATGGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAG
TTAATGGCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTG
ACGACGTCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTT
CCCCTTCCATTTGCCGGCGAGTAACGGCACGGCGTTCTCCTCCAAGTACA
CTCCTATCGCCGTGAACTTCACGAACTTCCCTTCAATCTCCAATCCTCTC
TCCCCTGCGCCGCCGAGGAAATGCGACTTTGTTGATCCTG
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