CF834042

Overview
NameCF834042
Unique NameCF834042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1_LOTJA (Chalcone--flavonone isomerase 1 OS=Lotus japonicus GN=CHI1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.047e-55
Identity = 107/191 (56.02%), Postives = 143/191 (74.87%), Query Frame = -3
Query:  216 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 785
            + KS+FLGGAGERGL IEGKF+KFT IGVYLE+ AV  LA KWKGK+++EL +S++FFRD+++ P EK ++ + + PL+G +YS KV ENC+A  K  G Y +AEA AIEKF   F+   FPPGSS+ + QS+ G L +SFS D +IP++   VIEN  LSEAVLE+MIG++ VSP  K+ LAER+  ++N
Sbjct:   28 TAKSYFLGGAGERGLTIEGKFIKFTGIGVYLEDTAVDSLATKWKGKSSQELQDSLDFFRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSAGTYGEAEATAIEKFAEAFRKVDFPPGSSVFYRQSTDGKLGLSFSLDDTIPEEEAVVIENKALSEAVLETMIGEHAVSPDLKRCLAERLPIVMN 218          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI2_MEDSA (Chalcone--flavonone isomerase 2 (Fragment) OS=Medicago sativa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.197e-55
Identity = 109/189 (57.67%), Postives = 142/189 (75.13%), Query Frame = -3
Query:  216 KSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 779
            KS+FLGGAGERGL IEG F+KFTAIGVYLE+ AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF   FK   FPPG+S+ + QS  G L +SFS D SIP+   A+IEN  +S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:    1 KSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 189          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1_MEDSA (Chalcone--flavonone isomerase 1 OS=Medicago sativa GN=CHI1 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.197e-55
Identity = 109/189 (57.67%), Postives = 142/189 (75.13%), Query Frame = -3
Query:  216 KSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 779
            KS+FLGGAGERGL IEG F+KFTAIGVYLE+ AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF   FK   FPPG+S+ + QS  G L +SFS D SIP+   A+IEN  +S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:   26 KSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 214          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI3_LOTJA (Chalcone--flavonone isomerase 3 OS=Lotus japonicus GN=CHI3 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.800e-54
Identity = 104/191 (54.45%), Postives = 141/191 (73.82%), Query Frame = -3
Query:  216 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 785
            + KS+FLGGAGERGL IEGKF+KFT +GVYLE+  V  LA KWKGK+++EL +S++F+RD+++ P EK ++ + + PL+G +YS KV ENC+A  K  G Y +AEA AI KF   F++  FPPGSS+ + QS  G L +SFS D ++P+    VIEN  LSEAVLE+MIG++ VSP  K+ LAER+ A+LN
Sbjct:   27 TAKSYFLGGAGERGLTIEGKFIKFTGLGVYLEDKTVDSLATKWKGKSSQELLDSLDFYRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSTGTYGEAEAAAIGKFAEAFRNLDFPPGSSVFYRQSPDGELGLSFSPDDTLPEKEAVVIENKALSEAVLETMIGEHAVSPDLKRCLAERLPAVLN 217          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CF1B1_SOYBN (Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.183e-53
Identity = 107/186 (57.53%), Postives = 141/186 (75.81%), Query Frame = -3
Query:  234 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 788
            GSTKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  LA KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPPGS++ + QS +G+L +SFSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:   25 GSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 210          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CF1B2_SOYBN (Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.414e-52
Identity = 105/185 (56.76%), Postives = 140/185 (75.68%), Query Frame = -3
Query:  234 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 785
            STKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  L  KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y++AE KAIE+F   FKD+ FPPGS++ + QS +G+L +SFSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:   26 STKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLGAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMESVGTYSEAEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 210          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI2B_SOYBN (Chalcone--flavonone isomerase 2-B OS=Glycine max GN=CHI2-B PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.044e-51
Identity = 106/187 (56.68%), Postives = 140/187 (74.87%), Query Frame = -3
Query:  234 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSL-TISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 788
            GSTKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  LA KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPPGS++ + QS +G+L  + FSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:   25 GSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGQLIFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 211          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1_SOYBN (Chalcone--flavonone isomerase 1 (Fragment) OS=Glycine max GN=CHI1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.390e-44
Identity = 91/163 (55.83%), Postives = 118/163 (72.39%), Query Frame = -3
Query:  231 FTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERI 716
            +T IGVYLE+ AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG   L+ QS  G L +SFS+D +IP+   AVIEN  +S AVLE+MIG++ VSP  K+ LA R+
Sbjct:    1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGPLFLYRQSPDGILGLSFSEDVTIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRILASRL 163          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_PEA (Chalcone--flavonone isomerase OS=Pisum sativum GN=CHI PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.271e-41
Identity = 97/194 (50.00%), Postives = 130/194 (67.01%), Query Frame = -3
Query:  216 TKSH-FLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS----SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 782
            T++H FLGGAGERGL I G F+KFT IGVYLE+ A   LA KW+GK  EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAE +AI+    + +  IF     +L  ++     G L +S SKD SIP+   A+IEN   S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:   26 TENHIFLGGAGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKL-EELLETLDFYRDIISGPFEKLIRRSKIKELSGPEYSRKVMENCVAHLKSVGTYGDAEVEAIQNLQKLSRMLIF---HLVLLKKNRQSPDGILGLSSSKDISIPEKEDAIIENKAASSAVLETMIGEHAVSPDLKRCLAARLPALLN 215          
The following BLAST results are available for this feature:
BLAST of CF834042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI1_LOTJA3.047e-5556.02Chalcone--flavonone isomerase 1 OS=Lotus japonicus... [more]
CFI2_MEDSA5.197e-5557.67Chalcone--flavonone isomerase 2 (Fragment) OS=Medi... [more]
CFI1_MEDSA5.197e-5557.67Chalcone--flavonone isomerase 1 OS=Medicago sativa... [more]
CFI3_LOTJA9.800e-5454.45Chalcone--flavonone isomerase 3 OS=Lotus japonicus... [more]
CF1B1_SOYBN2.183e-5357.53Chalcone--flavonone isomerase 1B-1 OS=Glycine max ... [more]
CF1B2_SOYBN2.414e-5256.76Chalcone--flavonone isomerase 1B-2 OS=Glycine max ... [more]
CFI2B_SOYBN2.044e-5156.68Chalcone--flavonone isomerase 2-B OS=Glycine max G... [more]
CFI1_SOYBN5.390e-4455.83Chalcone--flavonone isomerase 1 (Fragment) OS=Glyc... [more]
CFI_PEA4.271e-4150.00Chalcone--flavonone isomerase OS=Pisum sativum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834042 ID=CF834042; Name=CF834042; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTGGTCGGGACATCAGCATTCGTAAATTAACCCAT
AATTTGGGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAG
GAAAGGACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACA
ACTCTGCCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCAT
CTTATCACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCT
TCTTTGCTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACT
GCCTCAGAAAGCAGATTATTCTCTATTACCGCAACACCATCTTTCGGTAT
TGAACCGTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGAGTAA
AGAGAATTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTG
AATTTTTCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTT
CCATATGGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAG
TTAATGGCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTG
ACGACGTCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTT
CCCCTTCCATTTGCCGGCGAGTAACGGCACGGCGTTCTCCTCCAAGTACA
CTCCTATCGCCGTGAACTTCACGAACTTCCCTTCAATCTCCAATCCTCTC
TCCCCTGCGCCGCCGAGGAAATGCGACTTTGTTGATCCTG
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