CF834043

Overview
NameCF834043
Unique NameCF834043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:1..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_SAUME (Chalcone--flavonone isomerase OS=Saussurea medusa GN=CHI PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.037e-76
Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 728
            M P PS T +QVE++ F PS++PPG+T + FLGGAG RG+EI+G FVKFT IGVYLE+ A+P LA KWKGKTA ELT+SV+F+RD+VTGPFEKF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   IEKF  VFKDE F PGSSILFT S +GSLTISFSKDG+IP+    V+EN  L++ V+ES+IG++GVSP AK+SLA R+S  +    +K
Sbjct:    1 MAPPPSSTSIQVESIVFPPSVKPPGATTTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPSLAVKWKGKTAAELTDSVQFYRDIVTGPFEKFSQVTMILPLTGKQYSEKVSEMCIGVWKAQGTYTDADTATIEKFLEVFKDENFLPGSSILFTTSPTGSLTISFSKDGNIPEAATVVLENRKLAQTVIESVIGEHGVSPEAKQSLASRLSDFMTQFDEK 221          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_CALCH (Chalcone--flavonone isomerase (Fragment) OS=Callistephus chinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 5.181e-76
Identity = 144/213 (67.61%), Postives = 170/213 (79.81%), Query Frame = 3
Query:   75 PSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 710
            P+P  T LQVE++ F  S++PPGST S FLGGAG RG+EI+G FVKFT IGVYLE+ A+PLLA K KGKT  EL +SVEFFRD+VTGPFEKF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   IEKF  VFKDE F PGSSILFT S  GSLTISFSKDG+IP+    V+EN  L++AV+ES+IGKNGVSPA K+SLA R+S L+
Sbjct:    3 PTPLTTGLQVESIVFPSSVKPPGSTNSLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAAKRKGKTVAELLDSVEFFRDIVTGPFEKFTQVTMILPLTGKQYSEKVSEMCVGVWKALGTYTDADGTTIEKFLEVFKDENFLPGSSILFTTSPLGSLTISFSKDGTIPEAANVVLENEKLAQAVIESVIGKNGVSPATKQSLASRLSDLM 215          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_EUSGR (Chalcone--flavonone isomerase OS=Eustoma grandiflorum GN=CHI PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.507e-75
Identity = 143/215 (66.51%), Postives = 168/215 (78.14%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 713
            M P  SV+E+QVE+  F P++ PP STKS  LGGAG RGLEI G FVKFTAIG+YL+E A+P LAGKWKGKTAEEL +SV+FF D++TGPFEKF +VT+ILPLTG QYS KV+ENC A WK  G+YT A+ KAIEKF  VF+ + F PG SILF  S  SLTISF K G IP+   AVIEN  LSEAV+ES+IG+ GVSPAAKKSLA RI+ +LN
Sbjct:    1 MAPPVSVSEVQVESYLFPPTITPPASTKSFLLGGAGVRGLEIGGNFVKFTAIGIYLDETAIPWLAGKWKGKTAEELADSVDFFADIITGPFEKFTQVTLILPLTGQQYSGKVSENCTAQWKAAGVYTPADGKAIEKFLQVFEPQSFSPGDSILFMHSPESLTISFGKAGDIPETSNAVIENKKLSEAVIESVIGEKGVSPAAKKSLATRIAHVLN 215          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_IPOBA (Chalcone--flavonone isomerase OS=Ipomoea batatas GN=CHI PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.969e-75
Identity = 143/214 (66.82%), Postives = 173/214 (80.84%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 707
            M+  P V E++VE+  F  + +PPG+ K+  LGGAG RGL I+GKFVKFTAIGVYLE +AVP LA KW GK+AEELT+SV+FFRD+VTGPFEK  ++TMILPL+G QYSEKV+ENC+A WK  G+Y DAE+KAIEKF  VF D++FPPG+SI FTQS  GSLTISFSK+GS+P+   AVIEN  LSEAVLES+IG  GVSP AK+SLA R+S L
Sbjct:    1 MSAPPCVAEVKVESYVFPATAKPPGTAKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAVKWNGKSAEELTDSVQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVSENCVAFWKAAGMYGDAESKAIEKFNDVFSDQMFPPGASIFFTQSPHGSLTISFSKEGSMPEIASAVIENKPLSEAVLESIIGSKGVSPEAKQSLAVRLSEL 214          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI2_PETHY (Chalcone--flavonone isomerase B OS=Petunia hybrida GN=CHI2 PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.571e-75
Identity = 146/214 (68.22%), Postives = 174/214 (81.31%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 707
            M+PS SVT++QVEN  F P+++PP STK+ FLGGAG RGL++EGKFVKFT IGVYLEE+AV  LA KWKGK+AEEL  SV+FFRD+VTGPFEKF +V  ILPLTG Q+SEKVAENC+A WK  G Y+DA ++AIEKF  V K E F PG+SILFTQS  GSLTISF+KD SI + G AVIEN   SEAVLE++IG++GVSPAAK S+A R+S L
Sbjct:    1 MSPSVSVTKVQVENYVFPPTVKPPASTKTLFLGGAGHRGLDVEGKFVKFTVIGVYLEESAVQFLAPKWKGKSAEELIHSVDFFRDIVTGPFEKFTRVRFILPLTGKQFSEKVAENCVAHWKATGTYSDAGSRAIEKFLNVVKSETFLPGASILFTQSPLGSLTISFTKDDSISEAGNAVIENKQFSEAVLETIIGEHGVSPAAKCSIAARMSEL 214          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_ALLCE (Chalcone--flavonone isomerase OS=Allium cepa GN=CHI PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.386e-75
Identity = 138/211 (65.40%), Postives = 168/211 (79.62%), Query Frame = 3
Query:   84 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 713
            +VT+L VE   F   + PPGS+K+HFLGGAG RGLEI GKF+ FTAIG+YLE +++P LA KWKGKT EEL  S++FFRD+ TGPFEKF  VTMILPLTG QYSEKV ENC+A WK  GIYTDAEA A++KF   FK E FPPGSSILFT + SG+L I+FSKDGS+ KD   +IEN  L++AVLES+IG++GVSPAAK S+A R+S ++N
Sbjct:    3 AVTKLDVEGTAFDSVIIPPGSSKTHFLGGAGVRGLEIGGKFIAFTAIGIYLETDSIPFLADKWKGKTGEELAGSLDFFRDICTGPFEKFTNVTMILPLTGEQYSEKVTENCVAYWKAIGIYTDAEASAVDKFKQAFKPESFPPGSSILFTHTPSGTLKIAFSKDGSVSKDEGVLIENKALTQAVLESIIGEHGVSPAAKLSIASRLSEIMN 213          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_IPOPU (Chalcone--flavonone isomerase OS=Ipomoea purpurea GN=CHI PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.481e-75
Identity = 140/214 (65.42%), Postives = 172/214 (80.37%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 707
            M+  P V E++VE+  F  +++PPG+ K+  LGGAG RGL I+GKFVKFTAIGVYLE +AVP LA KW GK+ EELT+SV+FFRD+VTGPFEK  ++TMILPL+G QYSEKV ENC+A WK  G+Y DAE+KAI+KF  VF D++FPPG+SI FTQS  GSLT+SFSKDGS+P+   AVIEN  LSEAVLES+IG  GVSP AK+SLA R+S +
Sbjct:    1 MSAPPCVAEVKVESYVFPATVKPPGTAKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAVKWNGKSVEELTDSVQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVTENCVAFWKAAGMYGDAESKAIDKFNDVFSDQMFPPGASIFFTQSPLGSLTVSFSKDGSMPEIASAVIENKPLSEAVLESIIGSKGVSPEAKQSLAVRLSEM 214          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_RAPSA (Chalcone--flavonone isomerase OS=Raphanus sativus GN=CHI PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 9.770e-75
Identity = 142/214 (66.36%), Postives = 173/214 (80.84%), Query Frame = 3
Query:   72 NPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 710
            +P P+  +LQV++VTF PS+  P S+ + FLGGAG RGLEI+GKFV FT IGVYL+  +VP L+ KW+GKT EELTESV FFR++V G FEKF+KVTM LPLTG QYSEKV ENC+AIWK  GIYTD+EAKA+E+F  VFKDE FPPG+SILF  S  GSLT++FSKD SIP+ G AVIEN LL+EAVLES+IGKN VSP A+  +AER++ L+
Sbjct:    8 SPLPTAPKLQVDSVTFPPSVISPASSNTLFLGGAGVRGLEIQGKFVIFTVIGVYLDPVSVPSLSVKWEGKTTEELTESVPFFREIVIGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDSEAKAVERFLEVFKDETFPPGASILFALSPEGSLTVAFSKDDSIPETGKAVIENKLLAEAVLESIIGKNRVSPGARLRVAERLAQLM 221          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_TOBAC (Chalcone--flavonone isomerase OS=Nicotiana tabacum GN=CHI PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.177e-74
Identity = 143/206 (69.42%), Postives = 168/206 (81.55%), Query Frame = 3
Query:   96 LQVENVTFTPSL-QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 707
            + +EN  F  ++  PPGST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWK K++EEL  S++FFRD+VTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTDAE++AIEK   +F++E FPPG+SILFTQS  G+LTISF KD SI   G AVIEN  LSEAVLES+IGK+GVSPAAK S+AER+S L
Sbjct:    4 ITIENYVFPSTMVNPPGSTNTFFLAGAGNRGLEIEGKFVKFTAIGVYLEESALPFLAAKWKSKSSEELANSLDFFRDIVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKAIGTYTDAESQAIEKLLNIFQNETFPPGASILFTQSPVGALTISFIKDDSITGTGNAVIENKQLSEAVLESIIGKHGVSPAAKCSIAERVSGL 209          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.080e-73
Identity = 145/210 (69.05%), Postives = 171/210 (81.43%), Query Frame = 3
Query:   81 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 707
            PSVT + VENVTF P+++PP S  + FL GAG RGL+I   FVKFTAI VYL+ +A+  L+ KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF +VFKD  FPPGSSILFT S +GSLTISFS D +IP+   AVIEN LLSEAVLESMIGKNGVSPAAK+SLA R+S L
Sbjct:    4 PSVTSVTVENVTFPPTVKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSHL 213          
The following BLAST results are available for this feature:
BLAST of CF834043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_SAUME3.037e-7663.80Chalcone--flavonone isomerase OS=Saussurea medusa ... [more]
CFI_CALCH5.181e-7667.61Chalcone--flavonone isomerase (Fragment) OS=Callis... [more]
CFI_EUSGR1.507e-7566.51Chalcone--flavonone isomerase OS=Eustoma grandiflo... [more]
CFI_IPOBA1.969e-7566.82Chalcone--flavonone isomerase OS=Ipomoea batatas G... [more]
CFI2_PETHY2.571e-7568.22Chalcone--flavonone isomerase B OS=Petunia hybrida... [more]
CFI_ALLCE4.386e-7565.40Chalcone--flavonone isomerase OS=Allium cepa GN=CH... [more]
CFI_IPOPU7.481e-7565.42Chalcone--flavonone isomerase OS=Ipomoea purpurea ... [more]
CFI_RAPSA9.770e-7566.36Chalcone--flavonone isomerase OS=Raphanus sativus ... [more]
CFI_TOBAC2.177e-7469.42Chalcone--flavonone isomerase OS=Nicotiana tabacum... [more]
CFI3_SOYBN1.080e-7369.05Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834043 ID=CF834043; Name=CF834043; organism=Citrus sinensis; type=EST; length=770bp
CAAAATCTCTTCCCTTCAAAAATTAAGTCTTAAACACACACTGAAATTAA
TCAACAAGGCTGTCACCGATGAATCCCTCACCGTCCGTCACCGAACTGCA
GGTCGAGAACGTCACTTTCACGCCGTCCCTGCAACCTCCAGGATCAACAA
AGTCGCATTTCCTCGGCGGCGCAGGGGAGAGAGGATTGGAGATTGAAGGG
AAGTTCGTGAAGTTCACGGCGATAGGAGTGTACTTGGAGGAGAACGCCGT
GCCGTTACTCGCCGGCAAATGGAAGGGGAAGACTGCGGAGGAGTTGACGG
AATCCGTTGAGTTCTTCAGAGACGTCGTCACAGGTCCCTTTGAGAAATTC
ATGAAGGTGACAATGATCTTGCCATTAACTGGTGCACAATACTCAGAGAA
GGTTGCCGAAAATTGCATGGCCATATGGAAGTTTTTTGGAATTTACACAG
ATGCTGAAGCCAAAGCTATTGAAAAATTCACTGCGGTCTTCAAGGATGAA
ATTTTCCCACCAGGATCCTCAATTCTCTTTACTCAATCATCAGGATCATT
GACTATCAGCTTCTCCAAAGACGGTTCAATACCGAAAGATGGTGTTGCGG
TAATAGAGAATAATCTGCTTTCTGAGGCAGTACTGGAGTCGATGATCGGC
AAGAATGGTGTTTCTCCTGCAGCAAAGAAGAGTTTGGCTGAAAGAATATC
AGCACTGTTGAATGTAACTAGTGATAAGATGAAATGAAGAAGTTGAAAAG
TTTGCCAAATAATAAGCGAA
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