CF834069

Overview
NameCF834069
Unique NameCF834069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.295e-67
Identity = 119/191 (62.30%), Postives = 149/191 (78.01%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGTA P NC+YQADYPDYYFR T S+H+  L++KFKR+C+KS ++KRY H+T+  L++NPN+CAY   SLD RQ ++V EVPKLG+EAA KAIKEWG  KS+ITHLIFC+  G+ MP ADY LTK+L L PSVKR M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGP+D H
Sbjct:   18 GPATILAIGTATPANCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYMHITEEYLKQNPNMCAYMAPSLDVRQDLVVVEVPKLGKEAAMKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTH 208          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.997e-67
Identity = 118/191 (61.78%), Postives = 152/191 (79.58%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT+LAIGTA P NC++QADYPDYYFR T S+H+T L++KFKR+C+KS ++KRY H+T+  L +NPN+CAY   SLD+RQ I+V EVPKLG+ AA+KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTKML L PSV R+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPS++H
Sbjct:   19 GPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTDLKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESH 209          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS3_SORBI (Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.997e-67
Identity = 118/191 (61.78%), Postives = 152/191 (79.58%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT+LAIGTA P NC++QADYPDYYFR T S+H+T L++KFKR+C+KS ++KRY H+T+  L +NPN+CAY   SLD+RQ I+V EVPKLG+ AA+KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTKML L PSV R+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPS++H
Sbjct:   19 GPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTDLKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESH 209          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.914e-67
Identity = 120/191 (62.83%), Postives = 152/191 (79.58%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G A ILAIGTANP N + QA+YPDYYFR TNS+H+T L++KFKR+C+KS ++KR+ HVT+  L++NPN+CAY   SLD+RQ I+V EVPKLG+EAA KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPSD H
Sbjct:   20 GPAGILAIGTANPANYVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHVTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTH 210          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 3.914e-67
Identity = 118/191 (61.78%), Postives = 150/191 (78.53%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGTA P NC+YQADYPDYYFR T S+H+  L++KFKR+C+KS ++KRY H+T+  L++NP++C Y   SLD+RQ ++V EVPKLG+EAA KAIKEWGQ KS+ITHLIFC+  G+ MP ADY LTK+L L PSVKR M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGP+D H
Sbjct:   18 GPATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYMHLTEEYLKENPSLCEYMAPSLDARQDVVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTH 208          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.914e-67
Identity = 117/191 (61.26%), Postives = 152/191 (79.58%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT++AIGTA PPNC+ Q+ YPDYYFR TNS+H+T L++KFKR+C+KS +KKRY ++ + IL++NP++CAY   SLD+RQ ++V EVPKLG+EAA KAIKEWGQ KS+ITHLIFC+  G+ MP ADY LTK+L L PSVKR M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGP+D H
Sbjct:   15 GPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.914e-67
Identity = 118/191 (61.78%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT+LAIGTA P NC++QADYPDYYFR T S+H+T L++KFKR+C+KS ++KRY H+T+  L +NPN+CAY   SLD+RQ I+V EVPKLG+ AA KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTKML L PSV R+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPS++H
Sbjct:   19 GPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAHKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESH 209          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.914e-67
Identity = 117/191 (61.26%), Postives = 152/191 (79.58%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT++AIGTA PPNC+ Q+ YPDYYFR TNS+H+T L++KFKR+C+KS +KKRY ++ + IL++NP++CAY   SLD+RQ ++V EVPKLG+EAA KAIKEWGQ KS+ITHLIFC+  G+ MP ADY LTK+L L PSVKR M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGP+D H
Sbjct:   15 GPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.914e-67
Identity = 119/191 (62.30%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATI+AIGTA P NC+ Q+ YPDYYFR TNS+H+T L++KFKR+C+KS + KRY H+T+ IL++NPNIC Y   SLD+RQ I+V EVPKLG+EAA+KAIKEWGQ KS+ITH++FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T IR+ KD AENN   RVL +CS+++  TF GPSD H
Sbjct:   15 GPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFSGPSDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.914e-67
Identity = 118/191 (61.78%), Postives = 153/191 (80.10%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT+LAIGTA PPNCL Q+ YPDYYFR TNS+H T L++KF+R+C+KS +KKRY ++T+ IL+++PN+CAY   SLD+RQ ++V E+PKLG+EAA KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPSD H
Sbjct:   15 GPATVLAIGTATPPNCLDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMYLTEEILKEHPNMCAYMAPSLDARQDMVVVEIPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTH 205          
The following BLAST results are available for this feature:
BLAST of CF834069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS1_GERHY2.295e-6762.30Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHS7_SORBI2.997e-6761.78Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]
CHS3_SORBI2.997e-6761.78Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=... [more]
CHSY_CARAN3.914e-6762.83Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHSY_CALCH3.914e-6761.78Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS5_SOYBN3.914e-6761.26Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS5_SORBI3.914e-6761.78Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]
CHS2_SOYBN3.914e-6761.26Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS2_SOLTU3.914e-6762.30Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS1_CASGL3.914e-6761.78Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834069 ID=CF834069; Name=CF834069; organism=Citrus sinensis; type=EST; length=625bp
TAATATATAATGGAGAAAGATAAAGATGGGAAGAACCAACTGCAAGGAGG
AGGGTTAGCCACGATCCTAGCCATCGGAACTGCAAATCCACCTAACTGCT
TATACCAAGCTGACTACCCTGATTATTACTTCCGTGACACCAACAGTGAC
CACGTGACTCTCCTCGAACAAAAATTCAAACGCATCTGCGAGAAATCAAA
TGTAAAGAAACGCTACTTCCATGTTACCCAATATATTCTCAGAAAGAACC
CGAATATATGTGCCTACGACGGCTCCTCCCTCGATAGCCGTCAATATATA
TTGGTTAGGGAAGTACCGAAACTTGGCGAGGAAGCGGCAAAAAAAGCAAT
CAAAGAATGGGGCCAATCAAAATCCCAGATCACGCATCTCATTTTCTGCT
CACTTGTGGGCATATACATGCCCAGGGCTGACTATCTGCTGACCAAAATG
TTGCGCCTCAACCCATCTGTCAAACGAGTCATGCTATACTTTCAAGGCTG
TTACATTGTCGCCACAGCCATCCGAATGGGCAAGGACTTTGCTGAAAACA
ACCCTGATACCCGCGTTCTATACATATGCTCTGACTTATCCCTTGGTACT
TTCCGTGGACCTTCTGATGCCCACT
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